KEGG   Austrofundulus limnaeus (annual killifish): 106520678
Entry
106520678         CDS       T06063                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03420  Nucleotide excision repair
alim04110  Cell cycle
alim04114  Oocyte meiosis
alim04120  Ubiquitin mediated proteolysis
alim04141  Protein processing in endoplasmic reticulum
alim04310  Wnt signaling pathway
alim04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106520678 (rbx1)
   04120 Ubiquitin mediated proteolysis
    106520678 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106520678 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    106520678 (rbx1)
   04350 TGF-beta signaling pathway
    106520678 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106520678 (rbx1)
   04114 Oocyte meiosis
    106520678 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106520678 (rbx1)
   03400 DNA repair and recombination proteins [BR:alim03400]
    106520678 (rbx1)
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     106520678 (rbx1)
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   106520678 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     106520678 (rbx1)
   Cul2 complex
     106520678 (rbx1)
   Cul3 complex
     106520678 (rbx1)
   Cul4 complex
     106520678 (rbx1)
   Cul7 complex
     106520678 (rbx1)
   Cul8 complex
     106520678 (rbx1)
   Cul9 complex
     106520678 (rbx1)
DNA repair and recombination proteins [BR:alim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106520678 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106520678 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 106520678
NCBI-ProteinID: XP_013868346
UniProt: A0A2I4BKS2
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGSNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggatgttgacacgccgagcggcagtaacagcggagcgagcaagaag
cgttttgaagttaagaagtggaatgctgttgcactgtgggcctgggacatcgtggtggat
aactgtgccatctgtaggaaccacatcatggatctctgcatagagtgtcaggccaaccaa
gcttctgctacatctgaagagtgcactgtggcgtggggtgtctgtaatcatgcctttcat
ttccactgtatctcacgttggctgaaaaccagacaggtgtgtcctctggacaacagagag
tgggagtttcagaaatacggacactag

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