Austrofundulus limnaeus (annual killifish): 106521252
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Entry
106521252 CDS
T06063
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106521252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106521252
Membrane trafficking [BR:
alim04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
106521252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
106521252
NCBI-ProteinID:
XP_013869207
UniProt:
A0A2I4BN72
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWAPKGEQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHAVCVERLKHAVRKGRICMQKGYNIIPVLSSEIVPIMELLASMKSHSVPEDV
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRANTSFKYDTGLFVQGLLKDSAGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRLELSTLWKTDSEEKIPLDTIIYTDETFTPDLNIFQDVAHEDSLVQC
FIDEVFMLKPGLSLRSSYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TKEGDLNIIMAFAEKLRAGLHSFVFGKSFYTSVQERDVLVSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccaccccaatcacctgctgtagcaaaatctgaggtagctgtggag
ggagaatgtccgctgctggccgccacctttgcctactgggacaacatcctgggtccgcgc
gtgcgtcacatctgggcgccgaagggcgagcagctgatgttcctcagcgacggcgaggtc
acctttttggccaatcacacgctgaacggcgagatcctgagaagcgccgagtgcggcgcg
gtggacgtgaagttcttcgtcctggccgagaagggcgtcatcatcgtgtccctgatcttt
gacggggagctgaagggggataagaacacgtgcgccctgtccatcattctgcctcagacg
gagctggccttctacctgccgctgcacgccgtctgcgtggagaggctaaagcacgccgtc
cgcaagggacgcatctgcatgcagaagggctacaacatcatcccggtgctgagctcggag
atcgtccccatcatggagctgctggcctccatgaaatcccacagtgtgcctgaagatgta
gatataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaagccatcagctctcatctgcagacgtgcggctgctcaatcgtggtcgggagc
aacccggagaaagtaaataagattgtgcgaactctgtgcctcttcctcacccccgctgag
agaaagtgctcccgtctctgcagagccaacacttcctttaagtatgacaccggcctgttt
gtccagggtctgctcaaggactccgcaggcagcttcgtcctgccgttccgccaggtgctg
tactcgccttaccccaccacgcacattgatgtcgacatcaacacggtgaagcagatgcca
ccgtgtcacgagcacacgtacaaccagcggcgctacatgcgcttagagctgagcaccctg
tggaagacggacagcgaggagaaaatacctctggacacgatcatctacacggacgaaacc
ttcactcctgacctgaatatattccaagatgttgcacacgaagactctttggtccagtgt
tttatagatgaggtgttcatgctgaagccgggcctgtccctgcggagctcctatctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggacgaa
acgcaaaaagggaagaagccgtttcgatcgttgcgcaacttgaagacggacctggatctg
acgaaggagggagacctgaatatcatcatggcgtttgctgagaagctgagggcggggctt
cactccttcgtgttcgggaagtcgttctacaccagcgttcaggagcgagatgtgctcgtg
agcttctga
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integrated database retrieval system
