Austrofundulus limnaeus (annual killifish): 106522814
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Entry
106522814 CDS
T06063
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106522814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106522814
Enzymes [BR:
alim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
106522814
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106522814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
EIIBC-GUT_N
Motif
Other DBs
NCBI-GeneID:
106522814
NCBI-ProteinID:
XP_013871446
UniProt:
A0A2I4BUL3
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MYDMYQASLQHQEAPNVMQYQNHYTEGPGAEDAVSGLSVQMDPALYQEPFYHSYPPVPNH
QYQEQVFQQNFREHQHYPAFQYQPQYQQSVQQQELMLQSSDHPQTPTSVKKKRGRPKQQP
EDGETKEEDEAEAAKKAKRLLNRFNGMSVAEVMAKTLPDVIAHNLDILIIGINPGLLSAF
KGHHYPNPGNHFWKCLFLSGLTEQQLNYMHDQNLPESYSIGFTNMVERTTPGSKDLSNKE
IREGGRQLLEKLQKYKPLIAAFNGKGIYEIFCKEIFGVKAKNLDFGLQPYRIPETETVCF
LMPSSSPRCAQFPRAQDKVHFYIKLKELRDQMKGLAPGREVVETQYSFDLQLAKEDAKRM
AIKEEQVDPEYESCSGLHSEMRQNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacatgtatcaggccagtctgcagcaccaagaggcaccaaatgtgatgcagtat
cagaatcattacaccgaaggtccaggggcagaggatgctgtgtccgggttatctgtccaa
atggacccagctctttaccaggaacctttttaccacagttaccccccagtcccaaaccat
caataccaggagcaggtcttccagcagaacttcagggagcatcaacactatcctgcattt
cagtaccagcctcagtatcaacagtcagtccagcaacaggagctgatgcttcagtcttct
gaccacccacaaactccgacatcggtaaagaagaaacgaggtcgacccaagcagcagcca
gaggacggtgagacaaaagaagaagacgaggctgaggcggctaaaaaggcgaagaggctt
ctaaaccgcttcaacggcatgtcggtggctgaggtcatggccaaaaccctccctgacgtt
atagcccacaacctcgacattttgataattggaataaatcctggactgttgtcagctttc
aaaggacaccattacccaaacccaggaaaccatttctggaaatgtttgttcctctctggt
ctgaccgagcagcagctgaactacatgcacgaccagaacctgccggagagctacagcatc
ggcttcaccaacatggtggagaggaccacccccggcagcaaggacctctctaataaggaa
attcgtgaaggaggtcgacagttactggaaaagctacagaaatataaaccactgatagca
gcatttaatggcaaaggtatttatgaaatcttctgcaaagaaatctttggtgtaaaagcc
aagaatctggattttggtctgcagccttatagaatcccagaaacagaaacggtttgcttc
ctgatgccatcgtcgagcccccgctgcgcccagtttccccgcgcccaggacaaggtgcac
ttctacatcaagctgaaggagctgcgggaccagatgaaaggcctggccccgggccgcgag
gtggtggagacgcagtactccttcgacctgcagctagctaaagaggatgcgaaaaggatg
gccatcaaggaggagcaagtggatcccgagtatgaaagctgcagtgggcttcatagtgaa
atgagacaaaacagctga
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