KEGG   Austrofundulus limnaeus (annual killifish): 106523428
Entry
106523428         CDS       T06063                                 
Symbol
aff4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106523428 (aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alim03021]
    106523428 (aff4)
Transcription machinery [BR:alim03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106523428 (aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int Peptidase_S64
Other DBs
NCBI-GeneID: 106523428
NCBI-ProteinID: XP_013872291
UniProt: A0A2I4BX22
LinkDB
Position
Unknown
AA seq 1143 aa
MASQSGNMNREDRNVLRMKERERRNQEIQQGGGEAFPANSPLFPEPYKVVSKEDKLSNRI
QSMLGNYDEMKEPIGDTLPKLGGKPSNSSSSSEEKSGPPLFVGDQRSVGSGGGSQSSKWT
PVGPAXGGSSSQSQKRSGLPGGHSGQRSGGGSSGSSNSSQRGEVREKKSSKHSGGSDHSK
SHTSSPAKGSLSSSSSHSRSSLSAEQHHSKERYRSRSPRDREANWDSPSRVHTSFPSGQH
SSQTFPPALMSKPISMLQKPTAYVRPMDGQETTEAKSSQADSYSGQSHSSTIGDVKPNGK
ASLTKLKIPSQPVEGSGDPNCVDEILKEMTQSWPPPLTAIHTPCKTEPSKFPFPTKDTHA
FPSGNKRGSSSKSSSSHQPKDCNDPPTMLKEDLIVSSSDDSDGEQDAKNASRNTSNNSEA
AEPSRDDSSSHSGSESSSGSDSESESSTTDSEANEHPRPASPEPEQLNKWQLDNWFKKAK
QCPASPIDNSVPSKCKKESRDFGRGSGSQGGGSKDSTAPAPSRDLRAPQKGAEGGRSRQK
SPAQSNGSTNPRIRVGKKQPKKSEKPPVVEEPKGGLKVESEPAPEIPPHQPKAATKGSRK
PSIKKEPKSSPRPSAASVTTTTDKRKTKAPTKTPQSREIISTDSSSSDSEGNDSIPSSSQ
TPKYTESIRTPVCVFSPVEEKELLSPLSDPEEHYPTRQPHQQALLVKIDLSLLSRIPGRP
YKEPVEIKVEREDSQDRDSKDFSKQSKSKRKHKNEEEATKPESKRFKTEDKSLSHHKNSS
KESKRPLEKKEEPAPSPSMSGPQRTPKGDHSSRKGTVSQSSSLLSSANGSRKEGSHSTKS
SSTSKHRKGDDKGRSTRDGKVDEKLPINQLAVPPLSTDDSKSQRSKLVFEDRAYSADHYL
QEAKKLKHNADALVNRFVKAVFYLDAVVSFIECGNALEKSAQEAKSPFPMYAETVELIKY
TMKLKSYMAPDATTADKRLAVLCLRCQSLLYLRLFKLRKDSALKYSKTLTEHLKNSLSNT
QAPSPGMGNKAAGMPSPVSPKLSPGTAGGYSSVSSSSSASSSVTIPQRIHQMAASYVQVT
SNFLYATEIWDQAEQLSKEQKDFFLELDKVMGALIFNTSSMTELVRYTRQGLHWLRLDAN
LIP
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggcctctcagtcaggcaacatgaaccgtgaggaccggaatgtgctccgaatgaaagaa
agagaaaggagaaatcaagaaatccagcagggaggaggagaggcctttccagctaattca
cctctcttccccgaaccctataaagttgttagcaaagaagataaactgtccaaccgtatc
cagagcatgctgggcaattacgacgaaatgaaagaaccaattggtgacacgcttccaaag
ctcggaggtaaaccttctaacagctcgtcttcctctgaagagaaatccggcccaccttta
tttgtcggggaccagcgcagcgttggtagcggcggcgggagccagagcagtaagtggact
cctgttggcccagcarccggcgggtcttcatcccaatcccagaaacgctctggactcccc
ggcggacacagcggccagaggagcggcggcggcagtagcggcagcagcaacagtagccaa
agaggtgaagtgcgagaaaagaagtcgagtaaacacagcggaggttcggatcactccaag
tcacacacatcaagtccggccaaggggtctctgagttcctccagcagccactcgcggagc
tccttgtctgctgagcagcatcacagcaaggagcgctaccggtccagatctccacgagac
agagaggcgaactgggactccccctcacgggttcacacctctttccccagcggacagcac
tcgagtcagacctttcctcccgctctcatgtccaarcccatctccatgctgcagaagccc
acagcttatgtgcggccaatggacggccaagaaactacagaagcaaagagttctcaagca
gacagctacagcggacagtcccacagcagcaccataggagatgtgaagcccaacggcaag
gcrtcactaaccaaactcaagatcccctcacagcctgtagagggctccggtgatccaaac
tgtgtggatgaaattctgaaggaaatgactcagtcgtggccccctccactcacagccatc
cacactccctgcaaaacagagccctccaagtttccattccccaccaaggatacacatgct
tttccaagtggaaacaagagaggcagctcatctaagagctccagcagccaccagcctaaa
gactgcaatgaccctcccacaatgctgaaagaagatttgattgtaagcagcagtgacgac
agtgatggagaacaagacgccaagaatgcctcaaggaacacaagcaataacagtgaagca
gctgaaccatccagggacgactccagcagccacagcggctcagagagcagctcaggctct
gacagcgagagtgaaagcagcacgactgacagtgaagccaacgagcacccacgacctgct
tctcctgaacctgagcagctcaacaagtggcagctggacaactggttcaagaaggccaaa
cagtgtcccgcttcccccatagacaacagcgtcccgtcgaagtgtaaaaaagagagccga
gatttcggccgtggttctggaagccaaggcggggggtcgaaagactccacagcaccagcc
ccgagcagagacttgcgagcgccgcaaaaaggtgcggagggtggccgcagccgtcagaag
tcccccgcccagagtaacggcagcacaaatcctcgcatccgagtgggcaaaaagcagccg
aaaaaatctgagaagcctcctgtggtggaggaaccaaaggggggtctgaaagtggagagc
gagccggctccagagatccccccmcaccaacccaaagctgccactaagggttcccgcaag
ccaagcatcaaaaaagaacccaaatcctcccccaggccctctgcggcctccgttaccacc
actacagacaaacgcaagaccaaggcgcccaccaagactccccagtctcgtgaaattatc
agcacagactcgtcatcgtcagactctgargggaacgacagcatcccctcatcctcacag
acgcccaagtacacagagagcatcaggacccccgtttgtgtgttttctcctgtggaagag
aaagagctgctgtcccctctcagcgatccagaggagcactaccccacaaggcagcctcat
cagcaggctttactcgttaagatagatctcagcttgctgtcgaggatcccaggacggcct
tacaaggagcctgtagagataaaagtggagagggaagactctcaagaccgagacagcaag
gacttcagtaagcagagcaagtccaagaggaaacacaagaacgaggaggaagctacgaag
ccrgagagtaagcgattcaagacagaagacaagtcgttatctcatcataaaaacagcagt
aaagagtcaaagcggcctttggaaaagaaagaggagccagccccctccccttctatgtca
ggtccwcagaggacacctaagggagaccattcaagtcgaaaggggacagtcagccagtcc
tccagcttgctgtcgagtgcgaacgggagcagaaaagaggggagtcacagcacaaagagc
agctccacctccaaacacagaaaaggagacgacaagggacgcagcacacgtgatgggaag
gttgacgagaaattaccaattaaccagttggcagtgcctcctctctccacagacgactcc
aagtctcagagatctaagctggtttttgaggacagggcttactcagctgatcactactta
caagaagccaaaaagctcaagcacaatgcagatgcactggtaaaccgttttgtgaaggct
gtcttctaccttgacgccgtggtttccttcatcgagtgtggcaatgctctggagaagagt
gcccaggaagccaagtcacccttcccaatgtatgctgaaacagtggagctcatcaaatac
ackatgaagttaaagagctacatggccccagatgctacaacagcagacaagaggctagct
gtgctttgcctccgatgccagtctctcctctacttgcggttgttcaagctgagaaaagac
agcgctctgaaatactccaaaacactcacagaacacttgaagaactctctgagtaacacc
caggctccctctcctggaatgggaaataaggcagctggtatgccctctccagtgtcgccc
aaactctcaccaggcacagcaggaggctactcatccgtcagcagcagcagcagcgccagc
tcgtctgtgaccatacctcagcgtatccaccagatggctgccagctacgttcaggtcacc
tccaacttcctgtacgccaccgagatctgggaccaggccgagcaactgtccaaggagcag
aaagattttttcctggagttggacaaagtgatgggtgctctgatctttaacaccagcagc
atgacagaactggtgcgctacactcggcagggtcttcactggctgcgcctggacgctaat
ctaattccctag

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