Austrofundulus limnaeus (annual killifish): 106523547
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Entry
106523547 CDS
T06063
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04120
Ubiquitin mediated proteolysis
alim04140
Autophagy - animal
alim04144
Endocytosis
alim04620
Toll-like receptor signaling pathway
alim04621
NOD-like receptor signaling pathway
alim04622
RIG-I-like receptor signaling pathway
alim05132
Salmonella infection
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106523547 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106523547 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106523547 (traf6)
04140 Autophagy - animal
106523547 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106523547 (traf6)
04621 NOD-like receptor signaling pathway
106523547 (traf6)
04622 RIG-I-like receptor signaling pathway
106523547 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106523547 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
106523547 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106523547 (traf6)
04121 Ubiquitin system [BR:
alim04121
]
106523547 (traf6)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106523547 (traf6)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106523547 (traf6)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
106523547 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
Sina_ZnF
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
zf-Nse
TRAF6_Z2
zf-TRAF_2
zf-rbx1
U-box
BLI1
zf-RING_11
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
106523547
NCBI-ProteinID:
XP_013872443
UniProt:
A0A2I4BXG0
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MSCFESTKGSLEEDSYDGAVGGELSDCALAMMEKERESLLSPSESPGTFMSTSSSSLQPA
APLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVDNE
MLSEDQLFPDNFAKREILSLTVRCPNSGCGEKMELRQLENHLAQCQFATMLCPLCQQAVR
KTNLEEHKTVECQKRLVSCPDCVTSFSYEEKELHEQQCLFANVKCQYCELELIRDQMESH
CDADCPKAPIACNFSMFGCKERMQRHDLAQHMQEFTQMHMRYMAEFLRGFCLNGTTPKPL
QMLGPSVSTEDQGAAASVPASGGLRRAASCSINTTSCQPSEEMQRLREMDGRLVKQDHQL
RELIILKETQAGQLAELRRRVSVLEETIKELESQQCHGIFIWPLRRFSALWRNQETGNSV
VEHSPGFYTGRPGYKLCLRLHLQSPNAPRCSNYISLFVHTMQGAFDGQLTWPFQGNIRLA
ILDQGPEPQHHVEVMETKPDLQAFQRPTINRNPKGFGYVTFMHLHQLNQRPYIKDDTLLI
RCEVTPRFDTVVHREGPTVQPRGPEASISKD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgctttgagagcacyaaggggagtctggaggaggacagctatgacggagcagtt
ggtggagagctgtccgactgtgccttggcaatgatggagaaggaacgagaatctcttcta
agcccttcggaaagtcctggcaccttcatgagcacctcctccagcagtcttcagcctgct
gccccccttcagggctatgacgtcgagtttgacccacccctagagagtaaatacgagtgt
cctatctgcctcatggctttgaggaatgccatacaaacacgctgcggtcaccgcttctgc
aagagctgtattgaaaagtctattcgtgatacaggacagcggtgccctgtggacaatgaa
atgctgtcagaagaccaactgtttcctgataactttgccaagagggagattttatcgcta
actgttcgctgtccaaaytctggctgcggtgagaaaatggagctccggcaattagagaat
catttggcacagtgtcagtttgccaccatgctttgcccactgtgccagcaggctgtgaga
aaaaccaacctagaggagcacaagactgtcgagtgccaaaaacgacttgtctcatgtcca
gactgtgtgacaagcttttcttacgaggagaaagagcttcatgagcagcagtgtcttttt
gccaatgtgaagtgtcagtactgtgagctggaactcatcagagaccaaatggaatcccat
tgtgatgcagattgccccaaagcacctattgcctgtaattttagcatgtttggatgtaag
gagaggatgcaacgccatgacctggcccagcacatgcaggagttcacacagatgcacatg
cgctacatggctgaatttttgcgtggcttctgcctcaacggcaccacgcccaaacctttg
caaatgcttggcccttccgtttccaccgaggaccagggcgctgcggcatccgtgccagcc
agcggtgggctcaggagagctgcgagctgcagcatcaacacgacatcgtgtcagcccagc
gaggagatgcagaggctcagagagatggatggacgactggtaaagcaggatcaccagctg
cgcgagcttatcatcttgaaagagacgcaagcagggcagcttgcagagctcaggcgtcgg
gtgtctgtgctggargaaacgataaaggaactagagtcccagcagtgtcacggcatcttc
atctggcccctcagaaggttctcagccctctggcgcaaccaagaaacaggaaactcggtg
gtcgagcacagccctggcttctacacwggtcgtccaggctacaagctgtgtctgcgtttg
cacctgcagagccccaacgccccgcgctgttccaactacatctcyctctttgtccacacc
atgcaaggagcttttgacgggcagctaacctggccgttccaaggcaacatccggctcgcc
atwctcgaccagggacccgagcctcagcaccacgtggaggtcatggagacgaagccggac
ctgcaggccttccagaggcccaccattaaccgcaaccctaaaggatttggctatgtcacc
tttatgcacctgcaycagctgaatcagagaccgtacattaaagacgacacgctcttgatt
cgctgtgaggttacgccacgctttgacactgtagttcatcgcgaaggaccaacagtacag
ccaagaggacctgaagcatctatttcaaaagactaa
DBGET
integrated database retrieval system
