Austrofundulus limnaeus (annual killifish): 106523850
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Entry
106523850 CDS
T06063
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106523850
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106523850
Protein phosphatases and associated proteins [BR:
alim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106523850
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106523850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
Serglycin
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
106523850
NCBI-ProteinID:
XP_013872880
UniProt:
A0A2I4BYQ8
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPPGESSRKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTKDDAAVASEDDSESGDGSGGGVGVQKSKSVTFSNTVEDERRSGPTLGVSALVRSIS
GMTRIDRGQEGQLEEVMGWGEEEEEEEGKPKSNGLKTSVVPPPSTTILPSSSSSFSTFSS
SLARTKNRLQRLSAPSAKTDSFKRLSYLFSRSKRKAPPTPLPLQSPSSFTISDGLLRPLG
GHGRSDFGLSDVTRSDSNLNEVGRSVDSPSFSRTNGRDSLMALPLPPPCPCQSLHCASNM
SESSARLLDSSEDVFQSEGVGRVDQGGVDRDGGGGLMMMMGGWLGPCEDVLGDSCDVLED
SVTTQL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacgcagctgtactacaagaaggcgacctattcgccgtaccgagaccgc
atcccgcttcagatcgtccgagctgaagtggagctgtctgcagaggagcgggcatacctc
actgctgtagagaaaggtgactatgcaggagtcaaacacgccctccgcgaggccgaggtc
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctggagatcatggagctcctcttggaccacggcatccacacgggc
gacgccctgctgtacgccatcagaaaggaggtggtgggcgccgtggagctgctgctgtcc
caccggaggccgagtggcgagaaacaggttccctccctgatgatggacagccagttctca
gagttcacccctgacataactcccatcatgctcgctgctcacaccaacaattacgagatc
atcaagctgctagtccagagaaaagtcaccatccccagaccgcaccagatccgatgcgac
tgtgtcgagtgtgtatccagttcagaggtcgacagccttcgtcattcgcggtctcgactc
aacatctacaaggctctggcctcgccctccctcatcgcgctgtccagtgaggaccccatc
ttgacggctttcagactgggctgggagctcaaagaactcagcaaggtggagaatgagttt
cgtcaagaatacgaggagctgtctcagcagtgcaagcgtttcgccaaagacctcctggat
caggccagaagctcgagagagctggagaccatcctgaaccacagggacaatgaccagagc
gaggaactggaccccaggcagtgccacgacttggccaagctcaaactcgcaatcaagtac
caccagaaagagtttgtggcgcagccgaactgtcagcagctactggccactctgtggtac
gacggcttccctggctggaggaggagacactgggccgtcaaactggtcacctgcttcatc
atcggacttttgtttcccgtcttctcactgatctacctgttggcaccaaagagcgctctg
ggacgcttcattaagaagcccttcatcaagttcatctgccacacggcgtcctacctgacc
ttcctcttcctcctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggacccccgcccaccatcgtggagtggatgattcttccctgggtgttgggcttcatctgg
gcagagatcaaggagatgtgggacggaggattcacagagtacatccacgactggtggaac
ctcatggactttgccatgaactccctctacttggccaccatctctctgaaaatagtggcc
tatgtcaagtataactcgtctcgtcccagggaggagtgggagatgtggcaccccacgctg
atagccgaggctctgttcgccatcgccaacatattcagctcactccggctcatctccctc
ttcacagccaactcccacctcgggcctctgcagatctccctggggaggatgctgctggac
atcctcaagttcctcttcatttactgtctggttctgttggcgtttgctaacgggttaaac
cagctgtatttctactatgagaccaaggcgtcagaagaaccaaacaactgcaaaggaatc
cgctgtgaaaagcagaacaacgccttctccacgttgttcgagaccctccagtccctcttc
tggtccgtcttcgggctgctgaacctgtacgtcaccaacgtgaaggctcgccacgagttc
acggagttcgtcggggcgacgatgttcgggacgtacaacgtcatctcgctggtggtgctg
ctcaacatgctgatcgccatgatgaacaactcctaccagctcatcgctgaccacgctgac
atcgagtggaagtttgctcgcaccaagctctggatgagttactttgacgagggcggcacg
ctgccgcctccgttcaacatcatccccagccccaagtccatctggtacctgctgatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggagagctcgcgcaaatgtgaa
aacctccgggagttcacggagcgtcacgctgacagtctgatacagaaccagcattaccag
gaagtgatccggaacctggtgaagaggtatgtggccgccatgattcgcagcgccaaaaca
gacgaaggactgacagaagagaactttaaggagctgaaacaggacatctccagtttccgc
tacgaggtgctggatctcctcggcaatcggcgtcctccacggcgacactactcctcctcc
agcgagaccactaaagatgacgccgcagtggcgtcggaggacgacagcgaatcgggcgac
ggcagcggaggaggagtcggggttcagaagtccaaaagcgtcactttctctaacacggtg
gaagatgaaaggaggtccggtccgacgctcggcgtgtctgcattggtgcgctccatttca
gggatgacacggatagacagagggcaggagggtcagctggaggaggtgatggggtggggg
gaggaggaggaggaagaggaggggaaaccaaagagcaacgggctgaagacgagcgtcgtc
cccccgccctccaccaccatcctcccctcgtcgtcttcgtcgttctccacgttctcgtcg
tcgctcgctcgcacgaagaaccgcctgcagcgcctgtcggccccgagcgcgaagacggac
tccttcaaacgcctctcctacctgttctcgcgctccaaacgcaaagccccgcccacgcca
ctccccctccagtccccgtcttccttcaccatctccgatgggttgctccggccgctgggg
ggccacggccgctccgactttggactcagcgacgtcaccagaagcgactccaacctgaac
gaggtgggccgctcggtggacagcccgtcgttctcgaggacgaacgggcgggactcgctc
atggcgctgcccctcccgcccccctgcccctgccaatccctgcactgtgcttccaatatg
tccgagtccagcgcgcgcctcctggactccagcgaggacgttttccagagcgaaggcgtg
ggacgggtggaccagggtggcgtggaccgggacggaggaggagggttgatgatgatgatg
ggcgggtggttgggaccctgtgaggacgtcttaggggacagctgtgacgtcttagaggac
tctgtcaccacgcagctatag
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