Austrofundulus limnaeus (annual killifish): 106524219
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Entry
106524219 CDS
T06063
Symbol
pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04382
Cornified envelope formation
alim04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106524219 (pkp1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106524219 (pkp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106524219 (pkp1)
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106524219 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT
ARM_ARMC5
HEAT_EZ
WRM1_C
ZER1-like_2nd
Arm_2
ARMC9_ARM
Atx10homo_assoc
Cnd1
HSF2BP_C
Motif
Other DBs
NCBI-GeneID:
106524219
NCBI-ProteinID:
XP_013873401
UniProt:
A0A2I4C075
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MMAPDPLRSATTVEGAEDTSLALPSDRSLSSGRQRVLDQVHSIKRTKSRQGRSVSSPTSP
SPKLSTYSEFGTFKFMPSKGNDLLSRTNSTMSTSYTKVANFQKTHSQSARVPKGRHISSS
TIWDQQTIKKPNGLKTSRSDPTLVPPLSPAQSRTLSTRRQNTIRSHQQSTSSMVNGINLT
NSQTGIVQSPSIQPQFDGRLGTMKMLKMEQTCETMLNSMSIMDITLKEAVVFLDQPEEDK
QHFGASAIQHYTFINDDAKIEVQALEGIPPLVNLLDSPNPQVSQTAAGALRNLVFKNKVN
KVQVYDCGGIAKALNLLKKTDSTETKKQITGLLWNLSSEDKLKQDLMNTALPALTERVVV
PFVSNDDKQYVDSSVFYNATGCLRNLSSGGVNERNIMRNCTNLISSLTTFVESCISKETT
DDKSLENCVCILHNLTYQLGKERPEAFSEYSQSRASVSQEKKNATVGCFSPRSSKVPNEC
SLDRHPEKSNDSSQSGVKSGVTSGVKLLCQPSVIDNYLWLLEYAKEEPIQEASCGALQNL
SASSEESGTVCKVLLEKFKDLPILESLIASENPTIRKTALSLLDNMSRSRVQVDMAKQML
PELVCQLGSSTDENRFNDEDAVALGNTILRLTLTDSEVTKKLVDKNMVSQLIKLSGKEAS
YPNGSKVVSALLYNMWNDKNLYTIVKKMGFEKINFVNKRSSEAFQSTFQLKND
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccggatccgctacgatcggcgacgaccgtcgagggcgcggaggacacctcg
ctcgcgctgccgtccgacaggagcctgagctcggggaggcagcgcgtgctggatcaggtt
cacagcattaagcggaccaagtccagacaaggcagaagcgtgtcgtctcctacaagccca
tcaccaaaactttcaacctacagtgaatttgggacattcaagtttatgccatccaaagga
aatgatttactcagtcgcaccaactccaccatgtcaacaagctacaccaaagtggccaat
tttcagaagacacatagtcaatctgctagagttcccaaaggaagacatatcagctcctcg
actatatgggatcaacaaacaatcaagaaacccaatgggctgaaaaccagtcgtagtgac
cctacattggtccctcctctttctccggctcagtcacgtaccttgagcacgagaaggcag
aacaccattcgatctcatcaacagagcacctcttccatggttaatggcataaacctcacc
aacagccaaacaggcattgtccagtcaccttctattcaacctcaatttgatggcaggttg
ggtacaatgaaaatgttaaaaatggagcagacatgtgagacaatgttgaactcaatgagc
ataatggacataaccttaaaagaagctgtggtgttcctggatcaacctgaagaagataaa
caacattttggagccagcgccatccagcactacacctttattaatgacgatgccaaaata
gaggtgcaagcattagagggtattccacctctagtgaacctgttggacagtcccaaccca
caagtgtcccagactgctgctggggctttgaggaatcttgtgtttaagaacaaggtcaac
aaggtgcaagtttatgattgtggtggtatagccaaggccttgaatctactaaagaagact
gattctactgaaaccaagaaacaaatcactggcctgctgtggaacctgtcttctgaagac
aagctgaagcaagacctaatgaatacagcactgcctgctctgacagaaagrgtggtagtg
ccgttcgtctcaaatgatgacaaacaatatgtcgactcatccgtcttctacaatgctaca
ggctgcctgaggaacctgagtagtggtggtgttaatgagaggaacataatgcgaaactgc
accaacctcatcagctcacttacgacatttgttgagtcctgtatctcaaaggaaaccact
gatgacaagtctttggagaactgtgtatgtattctccataatttaacctatcaactgggg
aaggagcgtccagaggcattcagtgaatattcccaatcaagagcgtccgtctctcaggag
aagaaaaatgccacagttggctgcttcagcccaaggagcagcaaggttccgaacgagtgt
tctttagacagacatccagaaaaaagcaatgattcttcccagtcaggagtgaaatcagga
gtgacttcaggagtgaagttgttgtgccaacccagtgtcattgacaactacctgtggttg
ctggaatatgccaaggaagaacccattcaggaggccagctgtggtgccctgcagaacctc
tcagccagcagcgaagagtctggaactgtgtgcaaagttttgcttgagaagtttaaagat
ttgcctatcttggagtctttgattgcatcagaaaaccctaccattcggaagactgccttg
tccttgctggataacatgtcccgtagcagagtgcaggtggacatggcaaagcagatgttg
cctgagttggtgtgccagctcggctcctccacagatgaaaataggttcaatgatgaagat
gctgtagcacttggtaacacaattctgagactgacgctgacagacagtgaggtcacgaag
aagcttgttgataaaaacatggtttctcagctgattaaattgagcggtaaagaggcgtca
tatcccaacgggagcaaagtggtgtcagcgctgttgtacaacatgtggaatgataagaat
ttgtacaccattgtgaaaaagatgggatttgaaaaaataaattttgttaacaaaaggtct
tcagaagccttccagtcgaccttccaacttaaaaatgattga
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