Austrofundulus limnaeus (annual killifish): 106524219
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Entry
106524219 CDS
T06063
Symbol
pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106524219 (pkp1)
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106524219 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Arm_2
ARMC9_ARM
HEAT_2
Atx10homo_assoc
Cnd1
DUF5691
Motif
Other DBs
NCBI-GeneID:
106524219
NCBI-ProteinID:
XP_013873401
UniProt:
A0A2I4C075
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MMAPDPLRSATTVEGAEDTSLALPSDRSLSSGRQRVLDQVHSIKRTKSRQGRSVSSPTSP
SPKLSTYSEFGTFKFMPSKGNDLLSRTNSTMSTSYTKVANFQKTHSQSARVPKGRHISSS
TIWDQQTIKKPNGLKTSRSDPTLVPPLSPAQSRTLSTRRQNTIRSHQQSTSSMVNGINLT
NSQTGIVQSPSIQPQFDGRLGTMKMLKMEQTCETMLNSMSIMDITLKEAVVFLDQPEEDK
QHFGASAIQHYTFINDDAKIEVQALEGIPPLVNLLDSPNPQVSQTAAGALRNLVFKNKVN
KVQVYDCGGIAKALNLLKKTDSTETKKQITGLLWNLSSEDKLKQDLMNTALPALTERVVV
PFVSNDDKQYVDSSVFYNATGCLRNLSSGGVNERNIMRNCTNLISSLTTFVESCISKETT
DDKSLENCVCILHNLTYQLGKERPEAFSEYSQSRASVSQEKKNATVGCFSPRSSKVPNEC
SLDRHPEKSNDSSQSGVKSGVTSGVKLLCQPSVIDNYLWLLEYAKEEPIQEASCGALQNL
SASSEESGTVCKVLLEKFKDLPILESLIASENPTIRKTALSLLDNMSRSRVQVDMAKQML
PELVCQLGSSTDENRFNDEDAVALGNTILRLTLTDSEVTKKLVDKNMVSQLIKLSGKEAS
YPNGSKVVSALLYNMWNDKNLYTIVKKMGFEKINFVNKRSSEAFQSTFQLKND
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccggatccgctacgatcggcgacgaccgtcgagggcgcggaggacacctcg
ctcgcgctgccgtccgacaggagcctgagctcggggaggcagcgcgtgctggatcaggtt
cacagcattaagcggaccaagtccagacaaggcagaagcgtgtcgtctcctacaagccca
tcaccaaaactttcaacctacagtgaatttgggacattcaagtttatgccatccaaagga
aatgatttactcagtcgcaccaactccaccatgtcaacaagctacaccaaagtggccaat
tttcagaagacacatagtcaatctgctagagttcccaaaggaagacatatcagctcctcg
actatatgggatcaacaaacaatcaagaaacccaatgggctgaaaaccagtcgtagtgac
cctacattggtccctcctctttctccggctcagtcacgtaccttgagcacgagaaggcag
aacaccattcgatctcatcaacagagcacctcttccatggttaatggcataaacctcacc
aacagccaaacaggcattgtccagtcaccttctattcaacctcaatttgatggcaggttg
ggtacaatgaaaatgttaaaaatggagcagacatgtgagacaatgttgaactcaatgagc
ataatggacataaccttaaaagaagctgtggtgttcctggatcaacctgaagaagataaa
caacattttggagccagcgccatccagcactacacctttattaatgacgatgccaaaata
gaggtgcaagcattagagggtattccacctctagtgaacctgttggacagtcccaaccca
caagtgtcccagactgctgctggggctttgaggaatcttgtgtttaagaacaaggtcaac
aaggtgcaagtttatgattgtggtggtatagccaaggccttgaatctactaaagaagact
gattctactgaaaccaagaaacaaatcactggcctgctgtggaacctgtcttctgaagac
aagctgaagcaagacctaatgaatacagcactgcctgctctgacagaaagrgtggtagtg
ccgttcgtctcaaatgatgacaaacaatatgtcgactcatccgtcttctacaatgctaca
ggctgcctgaggaacctgagtagtggtggtgttaatgagaggaacataatgcgaaactgc
accaacctcatcagctcacttacgacatttgttgagtcctgtatctcaaaggaaaccact
gatgacaagtctttggagaactgtgtatgtattctccataatttaacctatcaactgggg
aaggagcgtccagaggcattcagtgaatattcccaatcaagagcgtccgtctctcaggag
aagaaaaatgccacagttggctgcttcagcccaaggagcagcaaggttccgaacgagtgt
tctttagacagacatccagaaaaaagcaatgattcttcccagtcaggagtgaaatcagga
gtgacttcaggagtgaagttgttgtgccaacccagtgtcattgacaactacctgtggttg
ctggaatatgccaaggaagaacccattcaggaggccagctgtggtgccctgcagaacctc
tcagccagcagcgaagagtctggaactgtgtgcaaagttttgcttgagaagtttaaagat
ttgcctatcttggagtctttgattgcatcagaaaaccctaccattcggaagactgccttg
tccttgctggataacatgtcccgtagcagagtgcaggtggacatggcaaagcagatgttg
cctgagttggtgtgccagctcggctcctccacagatgaaaataggttcaatgatgaagat
gctgtagcacttggtaacacaattctgagactgacgctgacagacagtgaggtcacgaag
aagcttgttgataaaaacatggtttctcagctgattaaattgagcggtaaagaggcgtca
tatcccaacgggagcaaagtggtgtcagcgctgttgtacaacatgtggaatgataagaat
ttgtacaccattgtgaaaaagatgggatttgaaaaaataaattttgttaacaaaaggtct
tcagaagccttccagtcgaccttccaacttaaaaatgattga
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