Austrofundulus limnaeus (annual killifish): 106526305
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Entry
106526305 CDS
T06063
Symbol
hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106526305 (hps6)
Membrane trafficking [BR:
alim04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
106526305 (hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
106526305
NCBI-ProteinID:
XP_013876376
UniProt:
A0A2I4C8R2
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MSRFELKELSNFREYAGSLELTDILTSRDTNSLSDVRVSPDGRHIHIILREPKVGLMTCD
KYERPQPTQNHKKLELCFPRTVPVVDLCYLDHYNNNNNCSREAAVAAVIYEDGKAEFWIF
QESKAGWRLLQTSDLCTSPQARVVSVCVCSSFILWCEERPASSESSTSNKLGCCVCXRDF
EVEEGAVILAGAKVILHSSPRFTVISSGDYVHLLPDLKAKPASCTFKFFLTWSPRHDSFT
VSAVCRNTAIKKLSAKESDFRKLITDCLGYLSALEPPEIYGFSPTGCGGLLLLLSTGWLC
LLQKDGTMRKVYKLPENGLVQHGAHTNLCVYVNVVALVIGPNLHLIELSCGRELQKIVLK
SGGLLYVNQTERRTPHLLSEAGLFVVEDRKTDAADCSFKTSPPGFGTVEGVHPGALLVEA
VFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILRSFLGAGLKKKGAXPLQNGG
GEFVAGQDKLMASLEGELKALVSLEELKGGLVRGGPKEVEAVCETLMEKEVTRLLSASEL
DREALLYLNSIFSVFPRQAWRAAQAALQLHRNGEGSLSSRAPPDVWKAVLSHXQPSTPAA
SLLFQNGQPKHNSLKGGHSYKGRPPSSPSPPVLPVFELLCHSVLHFQPTWLPRFIELAQQ
QQGSVGLGLGLASSSWSFSGGRGAEGGENNVPLYKRALRVLAAANPDGGRRPDLEVELLL
VGGRPNAVLQALRILMGEGQWGRVTQVAQQFCKQSPLLNKEIFTTLLCEAAQRRDLDPHL
DLLWTLCPEDFTVTTILNLVLKSLPAPDASAQPSAFTNPSSSPPFVDPHSSSQLTVGLLK
PLLRKVLQSETKPSQRYVDILQSPSYPPPALPRQPTEQVSSATDSASCSSSSTAAPRTET
PEQQPSTHATIQRCSIALSAAPLGFTDS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtttgaactgaaagaactgtccaatttcagagaatacgcgggcagcctcgag
ctgacggacatattgacttcgagggacacaaacagcctgtcagatgtccgtgtaagcccg
gacggacgtcacatccatatcatcctccgcgagcctaaggtcggtctcatgacttgtgac
aagtacgaaagaccccagccgactcagaaccacaagaaactggagttgtgttttccacga
acggttccggtcgtggatctttgctatttggaccattacaacaacaataacaactgcagc
agagaagcggcagtcgctgcagtgatttatgaggatggaaaagcggagttttggatcttt
caggagagcaaggccggctggcgtctcctgcagacatcagatctgtgcaccagcccccag
gccagagtcgtgtctgtctgcgtttgctccagttttatcctctggtgtgaggagcgaccc
gcctcctcggagagctccacgagcaataagttggggtgctgtgtttgcakgcgtgacttt
gaggttgaagagggggccgtcatcttggctggggcgaaagtcatccttcacagcagtccc
agattcactgtgatcagctcaggggattacgtgcaccttctccctgacctgaaagcgaag
ccagcgtcgtgcaccttcaaattcttcctcacctggtcccctcgtcacgactccttcaca
gtcagcgccgtttgcaggaacaccgccatcaagaagctttcagccaaagagtctgacttt
aggaaactgatcactgattgtttagggtatttatcagctctggagccgcctgagatctac
ggtttttcgcctactggctgcggaggcctgctgcttctcctcagcactggctggctgtgt
ctcctgcagaaagatgggacgatgagaaaagtttacaaactgcccgagaacggtttggtg
cagcacggcgcacacacgaacctttgcgtttaygtgaacgttgtggcgctggtaataggg
ccaaacctgcatctgatagagttgagttgtggcagagaactgcaaaagattgtgttgaag
agtggcgggttgttgtatgtgaaccagaccgaaaggcgcactccacatctgctctcagaa
gctggactgtttgtggtggaggacagaaaaacagacgctgcagactgcagctttaaaacg
agccctcctggttttggcacggtcgagggcgttcatcccggagccctcctcgtagaggcc
gttttcgaggaggcttgtaaatactaccagcagaggagcctgagcagcacccagctcacc
gtggacacgttaaaaaaagggggaaggttccaggctcccatctccttagcctccatcctc
aggagcttcctcggcgccggcttgaagaagaagggtgccmagccgttgcagaacggagga
ggcgagttcgtcgcggggcaggacaagctcatggcttcrctggagggtgagctcaaggcc
ctggtgtctctggaggagctgaaggggggtttggtgaggggcggtcctaaggaggtggag
gcggtgtgcgagactctgatggagaaagaagtgacgaggctgctgtcggcgtcygagctg
gatagagaggctctgctgtacctgaactccatcttcagcgtcttcccccggcaggcgtgg
cgggctgcccaggctgcgcttcagctgcaccgcaacggggaggggtctctgtccagcagg
gctccccctgacgtgtggaaggctgtcctcagtcacrctcagccgtccacccctgcagcc
tcccttttgtttcagaacgggcagccgaaacacaacagccttaaaggtggtcacagttat
aaaggcagacccccctcctccccctccccacccgtcctgccggtgtttgagctcctctgt
cattcggtcctccacttccagcccacgtggctcccccgcttcatcgagctcgcccagcag
cagcagggctccgtgggtttgggtctgggcctcgcctcgtcctcctggagtttctccggc
ggccgaggagcggagggcggcgagaacaacgtgcccctctacaaacgagcgctgcgcgtc
ctggccgccgcaaacccggacgggggccggcgcccggacctggaggtggagctgctgctg
gtgggcgggcggcccaacgccgtcctgcaggctctgcggatcctcatgggcgagggccag
tgggggcgggtcacccaggtggcccagcagttctgcaaacagagcccgctgctcaacaag
gagattttcaccacgctgctctgcgaggcggcgcagcgccgagacctggaccctcacctg
gacctgctgtggaccctgtgccccgaagacttcaccgtcaccaccatcctgaacttggtg
ctgaaaagccttcccgctcccgacgcctccgcccagccctctgctttcacaaacccctcc
tcctcgcctccttttgtggaccctcacagcagcagccagttgaccgtagggctgctgaag
cccctgctgagaaaagtcctccagagcgagacgaagccgagtcagcgttacgtcgacatc
ctgcaatccccgtcgtacccacctccggctcttcctcgccaacccacggagcaggtgagc
tctgccacagactcggcttcgtgcagcagcagcagcaccgccgctcctcgcacagaaaca
cctgagcagcaaccgtccacgcacgcaaccattcaaaggtgcagcatcgcactctctgct
gcgccgcttggatttactgacagctga
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