Austrofundulus limnaeus (annual killifish): 106527291
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Entry
106527291 CDS
T06063
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04620
Toll-like receptor signaling pathway
alim04621
NOD-like receptor signaling pathway
alim04622
RIG-I-like receptor signaling pathway
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106527291 (traf3)
04621 NOD-like receptor signaling pathway
106527291 (traf3)
04622 RIG-I-like receptor signaling pathway
106527291 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106527291 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
zf-TRAF_2
Sina_ZnF
ATG16
zf-rbx1
zf-C3HC4_5
zf-RING_UBOX
Crescentin
DUF4201
FapA
GAS
zf-RING_5
TolA_bind_tri
Fez1
Motif
Other DBs
NCBI-GeneID:
106527291
NCBI-ProteinID:
XP_013877580
UniProt:
A0A2I4CC66
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGRISDGREVQIPLQQVAPSLVSPLSCSPTFTPPSFRTASHWPLCELPPPQGVPAGFL
PLLGGFRDHFVETPEAKYRCLDCGLVLCHPRQTECGHRFCQSCINKILSGPNPTCPTDKE
PLFKDKIFKDVCCHREIMALKVFCRSEANGCQEQMSLQQIPDHLNVCPFYEVPCPLGKCK
ERMMRKEIPDHLTWKCKHRETSCEFCMAKMPLTELQKHKETVCPAFPVSCPNHCTFSSLP
RSELSSHQHDCPKAQVSCVFQRYGCTFKALNQDMRQHDSTFAAEHLRMMVTRNCLLENKV
EDVKEELVERYKVLPALSSRLSELENQNNELRDKNRQTEQKLVTMQKLMSSHSEKLLELE
LELRSLRALRDEVESLRGALDGVRTRLGTLEQGGRCGTGSTHTLATLETQVGRHDNMLSV
HEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKM
CARVYLNGDGMGKGSHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKP
DPNSSSFRRPAAEMNIASGCPLFVSQNLLETGSYIKDDTIFIKVGVRPPGPGSEPLRDIS
ILSLNKRIWFLFSLSSALVLAQH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgggaggatttctgatgggagggaagtgcagatccccctccagcaggtggcg
ccgtccctggtctcaccgctctcctgcagccccaccttcacgccgccctccttccgcacg
gccagtcactggcctctgtgtgaactcccccctccacaaggtgttcccgctggcttcctg
cctcttctcggaggattcagagatcacttcgttgaaacgccagaagccaaatatcgctgt
ttggactgcgggctggtcctgtgtcaccctcgtcagactgagtgtggacaccgcttctgt
cagagctgcatcaacaagatcctcagtggtccaaaccccacatgtccaaccgacaaggag
ccgttgttcaaagacaagatctttaaggatgtctgttgtcaccgtgagatcatggcactg
aaggttttctgtcggagcgaagccaacggctgccaggagcagatgagtctgcagcagatc
cccgaccacctgaacgtctgtcccttctacgaggtgccctgtccgttgggtaaatgcaag
gagaggatgatgaggaaggagattcccgaccacctgacctggaaatgtaaacacagagag
accagctgtgagttctgcatggccaagatgcctctgaccgagctgcagaaacacaaagag
actgtgtgtccagccttccccgtgtcatgtcccaaccactgcaccttctcctccctgccc
cgaagtgagctttccagccaccaacacgactgccccaaagcccaggtcagctgtgtgttc
caacgctacggctgcacattcaaggctttaaaccaagacatgagacaacacgactccacc
tttgcagccgagcacctgaggatgatggtgaccaggaactgcctgctggaaaacaaggtg
gaggacgtgaaggaggagctggtggagcggtacaaggttcttcccgctctgagcagccgc
ctgtcggagctcgagaaccagaacaacgagctccgagacaagaaccggcagacggagcag
aagctggtcaccatgcagaagctgatgagctcgcactcagagaagctgctggagctggag
ctggagctgcgttctctccgcgcgctgcgagacgaggtggagagcctgcggggcgcgctg
gacggtgtccggaccagactgggcactctggagcagggggggcgctgtggaaccgggtcc
actcacactctggccaccctggagacccaggtgggccgacacgacaacatgctgagcgtc
cacgagatccgcttggccgacatggacttacgcttccaggttctggagacggccagctac
aacgggactctgatctggaagatccgggactacaagaggcggaaacaggaggcggtggca
ggaaagaccctgtccctgtactcgcagccgttttacaccggctacttcgggtacaagatg
tgcgctcgggtctatctgaacggagacgggatggggaagggctcgcacctgtctctgttc
tttgtggtgatgagaggcgagtacgacgccctgctgccctggcctttcaaacagaaggtg
actctgatgctgatggaccagggtccttccaggaaacacctcggggacgccttcaagccc
gacccgaacagcagcagcttcaggcgccccgctgccgagatgaacatcgcctccggctgt
cctctgttcgtgtctcagaatctcctggagacgggcagctacatcaaagacgacaccatc
ttcatcaaggtgggggtccgtcctccaggaccagggtctgaacctttgagagacatttct
atattgtctctaaataaaaggatttggttcctgttttcactgagctctgcattagtgtta
gctcagcattag
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