Austrofundulus limnaeus (annual killifish): 106531012
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Entry
106531012 CDS
T06063
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106531012
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106531012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
106531012
NCBI-ProteinID:
XP_013882213
UniProt:
A0A2I4CQF8
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MSWLEFWSCRTQRAEQLRRSSELKLDCSQRSQLFGNHEVQAALQCERLCSLLPPVGSEVF
RRFTPASLEKYHLKGEAEGEEQHEGEEQHESEGAGQPEGDEHYKANGEEQPKDKQVHEAP
PRSYLKDLTKPANHLEAGKTLPFIYGDPPPLLLGSPLEDLDPFYQSQKTFIALCNNRIIH
RFNAESACYLFSPFNPLRTSATRILLHPVLTWILILTILTNCVFLVLRVSVMQSLNSAYV
EYIFMTMYTCEVLLKLVSRGVCWGPFTFIRDPWNWLDVLNIIGFVLQMFVPKLCVLPAIA
RVMKLFAYRPGLKKTAEALVQSVKRLVNVTILTVVLLSVLALVGLQLFMGVLRNKCVTWP
QDAGPFHNTTPPPGSVVPDSNSTNHSKDPFDFHDYINNNENHYYLPGSLDALVCGNTSDT
VMCPVGVCMKAGRNPNYGFTNFDSLGWSLLALLRILMQDLWDNLLLLTMRGAGKFSISVF
VLVFFPGCFLALSLVVAVVALALAEQKEAEFAEAKLVEEEYNQIVKVLKKREEVEEQWQA
SERAELQGEHESPQKKKNAAARSEEAEHVTVDDPEDDLRPSCSAVTHSILKGDCCGCWRT
LKEKLRPFVMSWFFNLGIILCIILNFIFLALEHYPVTENFHDLLLNSNLIFLAIFTLELL
LKLMALGAYAYFQVRWNIFDFVVVVFGLLDVVLANVEGLSLISTLRLMRVLRLGRWWSTL
GVLMKISWASVSPLGLVLVLVVFMFSVVGMDLFQEDYKDLVCRISSDCELPRWHMVDFFH
SVLLVFRVLCGEWVDSLWDCMEVSNRTVCVFFYVTVLLTGNLLVLILFLNLLLIPFRDEK
LATEGGKGTSMKWTKTWILERFRSLKGKLGPETEENGGKEHLALKTITSDQQILEGHPED
QDSCKVLPSPSAEEKKQREAVQKSEDPENQTGSGPEDCCCACCYLRCPIQDIDTSQGAGR
VWYKFRTVCLHIVQFRFFEAFIIFVILLSIAALMFESINPQQQPILQNLLDTADQVFTYI
FLLEMLLKWVALGFKKYFSSFWCWLDFIVLDVALLCLIFNTLGYSTEPLRVVRTLRALSR
FKGMRMVLRWMAASVPSMCRTILVVLFVWLIFSIIGVNLFAGKFDYCFNETSAEAFMVSE
VENKSECLGLSLNATEVNWKNAKFNFDNVVMGLLSLLIMATSTGWHDIMYAAVDSRTVEE
QPVYEVNLYMYLYFILFIIFGCFFTSILFIRGFIDMLTQHEHKIGGKHVFMTKNQLRFHG
TVRKMFSKTPEKAVPRPQNQCQARLFDLVTSPIFEIVVMVLICVYVVALMMEQDDQSLET
DIVFFWIHFIILILFYIEFILKIVALRHHYFRFGLNIMAFVILLLLTTGIFIADVFEKYF
FSPGFLPILRLAHICRILPLTRWARGIQTLLVSFLRSLPALLNIGLLFFLVTYTYAYVGM
YAFGHVKEEAMIDSMFNFKTFGNSMISMILVSPSSGWDGFLGPIMNTPPYCDPGVDCSSP
AGGIAFFTSYILLYLLLVVHLFVAVVLESFNCREPENSLSDEHLQMFYDTWRRFDLDASR
VINYSQLSDFCDQLQDPLRIPKPNNIKLIHMDLPLLPGDKICCLDILQALSTQVFESGQM
EDLKGRLEEKFNVHNPQEAQEPISSTLRRKQEEVAAGAIQRAFRRHRRQDKVE
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggttggagttttggagctgcaggacgcagagagctgagcagctgaggagaagc
tctgagctgaagctggactgctctcagaggagccagttgtttggcaaccatgaagttcag
gcggcgctgcagtgtgaacgactctgctctctgctgccccctgtcggctcggaggtcttc
aggcgtttcacgccggcttcgctggagaaataccatctgaaaggtgaagctgagggggag
gagcaacacgagggggaggagcagcatgaatcggagggggcggggcaacctgagggggat
gagcattacaaagctaacggggaggagcaaccaaaggacaaacaggtacatgaagcgcct
ccccggtcgtatttgaaggacctaaccaaaccggccaatcacctggaggcaggaaagacc
ctccccttcatctacggtgacccgccccctttgcttcttggtagcccattggaggatctg
gatcctttctaccaatcacagaagaccttcatcgctctctgtaacaaccggatcatccac
aggtttaacgctgagtcagcatgttacctgttcagtccgtttaatcctctgaggaccagc
gccaccaggatcctcctccaccctgttctcacctggatcctcattttgacaatcctgacc
aactgtgtgttcctggtgcttagagtttcagtgatgcaaagcttaaattctgcatatgtg
gagtacatattcatgaccatgtacacctgtgaggtgctgctgaagcttgtgtcccgaggc
gtctgctggggacccttcaccttcatcagagacccctggaactggctggatgtcctcaac
atcatcgggtttgtgctccagatgtttgttccaaaactttgtgttttgccagcaatcgct
cgtgtgatgaagctcttcgcctatagaccaggcctgaagaagacagccgaagctctcgtc
caatcagtgaagaggctggttaacgtcaccatcttgactgtggtcctcctcagtgttctg
gctctggttggtcttcagctcttcatgggggtcctcaggaacaagtgtgtcacctggcca
caggatgctggaccatttcacaacaccacccccccacctggttcagtggtcccagacagc
aactcgaccaatcacagcaaggaccccttcgacttccacgactacatcaacaacaacgaa
aaccattattacctgcctggtagtcttgatgctctggtgtgtgggaacacgtcggacact
gtgatgtgtccggtgggtgtctgtatgaaggccggcagaaacccaaactacggattcacc
aacttcgactcgttgggctggtctctgctggctctgctcaggatcctgatgcaggacctc
tgggacaacctgctgctgctgacgatgcgaggagcagggaaattctctatcagcgtcttt
gtcctcgtcttcttccccggatgtttcttggcgctcagcctcgtcgtggcggtggttgcc
ctggcgctggcagagcagaaagaggcggagtttgctgaagccaaactagtagaagaagag
tacaatcagattgtgaaagtgctgaagaagagggaggaggtggaggaacagtggcaggcc
tctgagagggcggagcttcagggtgaacacgagtcaccacagaagaagaagaatgcagct
gcacggagcgaggaggcggagcacgtcaccgtagacgaccctgaggatgaccttcgacct
tcgtgctctgccgtcactcacagcatcctgaaaggggactgctgtggctgctggcggaca
ctcaaagagaagctccgcccctttgtcatgagctggttctttaatctcgggattatcctc
tgcatcatcctcaacttcatcttcttggccctggaacattatccagtgacagaaaatttc
cacgatctgctgctgaattctaatctgatctttctggccattttcacgttggagctcctt
ctgaaactcatggctctgggcgcgtacgcctacttccaggtccgatggaacatctttgac
tttgtggtggtcgtcttcggtctgttggatgttgtgctggctaatgtggaggggctgtcc
ttgatatctaccctgcgattgatgcgagtcctgaggttgggtcggtggtggtccacactg
ggtgttctgatgaagattagctgggcctcggtcagtcctcttggtctggttctggttttg
gtggtcttcatgttctctgtggttggcatggatctcttccaagaggactacaaggacctg
gtctgcaggatctcatcggactgtgagctcccccgctggcacatggtggactttttccac
tcggtcctgctggtcttcagggtcctgtgtggcgagtgggtcgacagcttgtgggactgc
atggaggtgtccaaccggaccgtctgtgtcttcttctacgtcacggttctgctcaccgga
aacctcctggtcctgattctgttcttgaacctgctgctgatcccattccgggatgagaaa
ctggcaactgaaggaggaaaaggaaccagcatgaagtggaccaagacctggattctggag
cgattcaggtccttgaagggaaaactcggtcctgagactgaggagaacggcgggaaagaa
cacctggccctaaagaccatcacctcggaccaacagatcctcgagggtcaccctgaggac
caggactcctgcaaggtgttgcccagtccatctgctgaggagaaaaaacagcgtgaagcc
gtccagaagtctgaagaccccgagaatcaaacaggaagtggacctgaggactgctgctgt
gcatgctgttacctccgctgtcccatccaggacatagacacgtcccagggtgcagggagg
gtctggtataagttcagaacagtttgtctccacatcgttcagttcagattcttcgaggcc
ttcataatcttcgtcatcctgttgagcattgctgcattgatgtttgagagcatcaaccct
cagcaacaaccaatcctgcagaatcttttggacacagcagaccaggtcttcacctacata
tttctgttggagatgcttctcaaatgggtcgccctcgggttcaagaagtacttcagcagc
ttctggtgctggctcgacttcatcgtcctggatgttgctctgttgtgtttgattttcaac
acactggggtactcaacagaacctctgagggttgtgaggaccctgagagccctgtcccgc
ttcaaaggcatgaggatggtgttgcgttggatggcggcgagcgttccctccatgtgcaga
acaatactggttgttctgtttgtctggctgatcttcagcatcattggggtgaacctgttt
gcaggaaagtttgattactgtttcaatgagacgagtgcagaggccttcatggtatctgag
gtggaaaacaagtccgagtgtcttggcctttctttaaacgctactgaggtcaactggaag
aatgccaagtttaactttgacaacgtggtgatgggtctcctttctctgttgatcatggcg
acatctacgggctggcacgacatcatgtacgcagctgtggactccagaacggtagaggaa
cagccagtgtatgaagtcaacctgtacatgtacctgtacttcatccttttcatcatcttt
ggctgcttcttcacctccatcctcttcatcagaggcttcattgatatgcttacacagcat
gaacacaagattggagggaaacatgtttttatgacaaaaaatcagctgaggtttcatgga
actgtgaggaaaatgttctccaagacacccgagaaagctgtcccacgaccacagaaccag
tgccaggcccggctctttgacctggtgacgtcaccgatctttgagattgtggtgatggtg
ttgatctgtgtatacgtggtggctctgatgatggagcaggatgaccagtccttagaaaca
gatatagttttcttctggattcacttcatcatcctcatcctcttctacatcgagttcatc
ctgaagattgttgctcttcgacatcactacttccgctttggtttgaacatcatggccttt
gtgattctcctcttgttgaccacaggtatcttcatcgcagatgtgtttgaaaaatatttc
ttcagtcctggtttcttgcccatccttcgactggctcacatctgtagaatcctcccgttg
actcgctgggccagagggatacagacgctgcttgtgagcttcctgaggtcacttcctgcc
ctcctcaacatcggcctgctcttcttcctcgttacgtacacctatgcttatgttggcatg
tacgccttcggccacgtgaaggaggaggccatgatcgacagcatgtttaactttaagacg
tttggaaacagcatgatcagtatgattctggtcagcccgtcctctggatgggacggtttt
ctgggtcctatcatgaacacgcctccatactgtgacccgggtgtagactgcagcagccca
gcagggggcatcgccttcttcacctcctacatcctcctgtacctgctgctggtcgtccac
ctcttcgtcgctgttgtcctggagagcttcaactgcagggaaccagagaattccctgagc
gacgagcacctgcagatgttttatgacacctggaggaggtttgatctggatgcttcacgg
gtcataaattacagccagctgtcagatttctgtgaccaacttcaggacccgctaaggatt
cccaaaccgaacaacatcaaactgatccacatggatctgcctctgctccctggagacaag
atctgctgcctggacatactgcaagcactcagcacacaggtgtttgaatcaggacagatg
gaggatctgaagggcagattggaggaaaagttcaatgtccacaaccctcaggaggctcag
gaaccaatcagcagcaccctgcggaggaaacaggaagaggtggcggccggtgcgatccag
cgagcgttcaggagacaccgcaggcaggacaaagtggaatag
DBGET
integrated database retrieval system
