Austrofundulus limnaeus (annual killifish): 106532997
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Entry
106532997 CDS
T06063
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
alim04510
Focal adhesion
alim04540
Gap junction
alim04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106532997
04020 Calcium signaling pathway
106532997
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106532997
04540 Gap junction
106532997
09142 Cell motility
04810 Regulation of actin cytoskeleton
106532997
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alim01001
]
106532997
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alim04090
]
106532997
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
106532997
Protein kinases [BR:
alim01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
106532997
CD molecules [BR:
alim04090
]
Proteins
106532997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
APH
TCAD9
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
106532997
NCBI-ProteinID:
XP_013884648
UniProt:
A0A2I4CXC4
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MMASITRWTGSLDLLHFLFGVFLVFPEEAMFLELEPSASGLLLQSGSNFTVVCSGWSQVK
WTFLNYTQVDGVRVETQGFSSILQLSNVTWRNSRRYTCEEASAQQSRHIDIFIPGQGPDE
WFVPINSHVVMKTTEIDTIPCVVSDPKLNVSLYERASRTLVPGMTYEPARGFTGHLNDTS
YVCVASSRAKQKESQVFYVYSIIVPEVMEMELSVSRTVLKQGEGLTVNCTVRDPGVVVIS
WDFPRKQDIEPLTDILPNQIHSFINITKATLADSGMYVCKVLDTNQRRTVKKNITVTVLD
RGYVYLWSSGETNLSSILDNTVQLNVEVDAYPAPTITWTKYNKDFPMETTSINTTHLTSS
KYVSTLTLVQVQMNQTGSYTVTAANEDDSXEVVFHLEVIAAPRIMSLSEVGSNTIRCITE
GAPPPSVTWYTCPSSHRCNHLSGGWKNLSSVSKGVALKENTSKVMEGGLTQVHSMVVLEA
LSSVSAVRCEAVNSAGGRARDLRVLTQSLLSQVTVLVVVLVLLITAVIFFIILITLWRKK
PQYEVHWKLIESISSDGQQITFMDTEDLSYSSTWEIPRDHVVLGQVLGSGPFGCVVEATV
SGLIHSGSVNKAAVKMVKPRTSSVQSLMAELKVLAHLGPHLNIVNLLGTCTRGGPVYLIT
ELCCHGDLLSYLQRNKATFLQMDTPTNSSDSDSRVLSDSDGGYMDLTKNSGIQTIALKEL
QTAETPHTETDQASSLLSSDSSPLSLTDLISFSFQVAQAMDFLSSIQCVHGDLAARNVLV
SEGKLVKVCDFGLARDVLKNQDYIIRGNSFLPLKWMSPESIFQKIYSSESDVWSYGVLLW
EIFSLGCSPYPDLLTTKGFLCELKKGHRMDRPEHASPDIADLMTRCWEEVPWSRPSFSSL
AVAMGNMLSNDFKQRYFQITQEFLKGQSPAVVQSRRSLTTTTEDQSQGHTTQQRSPASEG
KDEQLEAGPSHHLSITGPPTDRSSSGSVQDTVSPVMSHSPAILEPQEVTSSSEPVQPSAF
SCCHEEEESCM
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatccatcacaagatggacaggaagtttggacctgctgcacttcctgtttggg
gtctttctggtttttcctgaagaggccatgtttcttgagctggagccctcagcctcaggt
cttctgctccaatcaggttccaacttcaccgtggtgtgttcagggtggagtcaagtcaaa
tggacgtttttaaactacactcaggtggatggagttagagtggagacacagggcttcagc
agtattctgcagctctccaatgtcacctggaggaattctcgaagatacacctgtgaggag
gcgtcagctcaacaaagcagacacattgacattttcatacctggacaaggtccagatgaa
tggtttgtccccataaactctcatgtagtgatgaagacgacagagatagatactatcccc
tgtgtggtgtctgacccaaagctcaatgtatctctgtatgaacgagcaagcagaactctg
gtcccaggaatgacgtatgagccagctagaggcttcacgggtcatctgaacgacacgtca
tatgtgtgtgtrgcatccagcagagccaagcagaaggaatctcaggtgttctatgtctac
agcatcatagtacctgaggtcatggagatggagctttcagtttccagaaccgtactgaaa
caaggggagggcttaacagttaactgcactgtcagagaccctggtgtggtggtcatctcc
tgggacttcccccgcaaacaggatatagaacctctgacagacatcttgcccaatcaaatc
cactcctttatcaacatcactaaggcaacacttgctgattcaggtatgtatgtgtgtaag
gtgctggacacaaaccagagacgaacagtgaagaaaaacatcacagtaactgttctggac
cgaggttaygtctacctctggtcctcaggtgaaactaatttgtcatccatcctcgataac
acggtgcagctgaatgtggaggttgatgcttaccctgctcccaccatcacctggaccaaa
tacaacaaggattttccaatggaaacaacttccatcaacaccactcacctgacaagtagc
aagtatgtcagcactctgaccctggttcaggtgcagatgaatcagacaggaagttacaca
gtaactgcagccaatgaggatgattctgwagaagttgtcttccacctggaagtcatagct
gcaccgaggatcatgtctttgtcagaagtcggcagtaacaccattcggtgcatcactgag
ggagctccacccccttctgttacatggtacacctgtcccagctcacacaggtgcaatcat
ttgagtggcggctggaagaatctgtcatcagtctcaaagggcgtggctttaaaagagaac
acaagcaaggtgatggaaggaggtcttacccaggtacacagcatggtggttctagaagct
ctcagctctgtgtcagctgttcgctgtgaggctgtgaactctgctggaggccgagcccga
gacctacgagtattgactcagtctctactgtctcaggtcacagtgttggtggtggttctg
gttctgctcataacagctgtcatctttttcatcatccttatcactctgtggagaaaaaaa
cctcagtacgaagtccactggaagctaattgagtcgataagttctgatggacagcagatc
accttcatggacactgaagacctgtcctacagctccacctgggaaatacctcgagaccac
gtagtactcggtcaagtgttgggttctggtccatttgggtgtgttgttgaagcgacagtg
tctggtttgattcattctggttcagtgaataaagcagcggtgaagatggtcaaacccaga
actagctcggtccaaagcctgatggcagagctgaaggttttggctcatcttggtcctcac
ctgaacattgtcaacctgctgggaacctgcacgagaggaggtcccgtctatctgatcact
gagctttgttgtcatggagacctgctgagttacctgcagaggaacaaagccacttttctc
caaatggacacgcccaccaacagctcggattcagattctcgggtcctcagcgacagtgat
ggtggttacatggacttgaccaagaacagtggcattcagaccattgctctgaaggagcta
caaactgcagagaccccacacacagagacagaccaggcatcatcactcctctccagtgac
tcatctcccctcagcctgactgatctcatcagcttctccttccaggtcgctcaggccatg
gacttcctgtcttcaatacagtgtgttcatggagacctggcagcgaggaatgtcctggtc
tctgaggggaagctggtgaaggtctgtgactttggtttggccagagatgtgctgaagaat
caagattacatcatcagaggaaatagttttctgccgctgaagtggatgtctccagagagc
atcttccagaagatctacagctcagagagcgatgtttggtcctacggggtcttactgtgg
gagatcttttctctaggctgtagtccgtatcctgaccttctgacaactaaagggtttctc
tgtgagctgaagaaaggacacagaatggacagacctgaacacgcttctcctgacatagcg
gacctgatgacacgatgctgggaggaggttccttggtccagaccttctttctcctcgttg
gctgttgccatgggcaacatgttgagtaatgacttcaaacagcgttacttccagataact
caagaattccttaaaggacaaagtccagctgtggttcagtcgagacgcagtttaaccaca
accacagaagatcagagccaaggacacacaacacaacaaagaagtcccgcctcagagggt
aaagatgagcagctggaggcaggcccctcccaccacctgtccatcactggccctcccaca
gacaggagcagcagtggctctgtgcaggacacagtgagccctgtgatgtcacattctcct
gccatcttggagccacaggaagtgacatcatcttcagaacctgtgcagccttctgcgttt
tcctgctgccacgaggaagaggagagctgcatgtga
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