Alkalibacter rhizosphaerae: J0B03_11370
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Entry
J0B03_11370 CDS
T07100
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0B03_11370 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_11370 (nth)
Enzymes [BR:
alka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J0B03_11370 (nth)
DNA repair and recombination proteins [BR:
alka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J0B03_11370 (nth)
Prokaryotic type
J0B03_11370 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF4317
HRDC
Motif
Other DBs
NCBI-ProteinID:
QSX08373
UniProt:
A0A974XHD0
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All DBs
Position
2296430..2297071
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AA seq
213 aa
AA seq
DB search
MKKLTKKNMAEVLNRLSKTYENPKPMLAFTTPFELVVATVLSAQCTDVRVNMITRELYAV
ANTPEDMLKLGVDGVREIIKSCGLSNSKSKNIIGLSQMLLDDFHRQVPQSMEELIKLPGV
GRKTANVVLSNAFGIPAIAVDTHVFRVSNRIGLADAKDVLATEKDLMKNIPKEMWSDAHH
WLIYHGRKICSARSPKCSSCIISDLCMFPDKNL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgacgaaaaaaaacatggcggaagttttgaatcgattatccaaaacgtat
gaaaatccaaaaccaatgctggcttttaccacgccttttgaactggtggtggccactgta
ttgtctgcccaatgtacagatgttcgggtaaacatgatcaccagagaactttatgcagtc
gccaacacaccggaagatatgttgaaactgggagtagatggagttcgtgagatcataaaa
agttgcggcctaagcaattcaaaaagcaagaacatcatcggactgagccaaatgctgctt
gacgacttccatcgccaagtgcctcaaagcatggaagaattgatcaaacttccaggagtt
ggacgtaagacagccaatgtagttttaagcaatgcctttggaattccggccatagcagta
gatacccatgtatttcgggtgtccaatcgaatcgggttggcagatgccaaagatgttttg
gcaacggaaaaagatctgatgaaaaacattccgaaagaaatgtggtcggacgctcatcac
tggctgatctatcatgggcgaaagatttgttccgcaagaagtccaaaatgcagttcctgc
ataatatcggatctgtgcatgtttccagacaagaatctgtaa
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