Alkalimarinus alittae: NKI27_06390
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Entry
NKI27_06390 CDS
T08567
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKI27_06390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_06390 (nth)
Enzymes [BR:
alkm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NKI27_06390 (nth)
DNA repair and recombination proteins [BR:
alkm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NKI27_06390 (nth)
Prokaryotic type
NKI27_06390 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
UZE97374
LinkDB
All DBs
Position
complement(1408390..1409031)
Genome browser
AA seq
213 aa
AA seq
DB search
MNKDIRTEIFRRLKADNPNPETELNYSTPFELLIAVILSAQATDVGVNKATDKLYPVANT
PEAIYALGLDKLKEYVKTIGLFNSKAANIIKTCDILIKKHNAEVPQDRESLEALPGVGRK
TANVVLNTAFGMPVMAVDTHIFRVSNRTKIATGKNVVDVEKRLMRLVPKEYLLDAHHWLI
LHGRYICTARKPKCGACIIEDLCEFKDKTEYSD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggatattcgcactgaaatatttagacgcttaaaagcggataatcccaaccct
gaaacggaacttaactacagcacgccttttgagttgctaattgcggttattttatctgct
caagctactgatgtaggcgttaacaaagcgacagataagctataccctgtcgccaatacc
cccgaagccatttatgcgctcgggttggataaactaaaagagtacgtcaaaacaattggc
ctatttaatagcaaagccgccaatatcataaaaacctgcgacattttaatcaaaaagcat
aacgctgaagtaccccaagaccgcgaatcgctagaagcactccccggtgttggccgaaag
acggccaatgtggtgctgaatactgcattcggcatgcctgttatggcggtagacacgcac
atctttcgcgtatctaatcgaaccaaaatcgcgacaggcaaaaacgtagtagacgttgaa
aaaagactgatgcgactagtgcccaaagaatatcttttagatgcccaccactggttgatt
cttcacggccgatatatttgcaccgcgcgaaagccaaaatgtggcgcctgtattatcgaa
gatttatgtgaattcaaagataaaaccgaatactctgattag
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