Alkalimarinus alittae: NKI27_19165
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Entry
NKI27_19165 CDS
T08567
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
alkm
Alkalimarinus alittae
Pathway
alkm01501
beta-Lactam resistance
alkm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NKI27_19165
01503 Cationic antimicrobial peptide (CAMP) resistance
NKI27_19165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alkm02000
]
NKI27_19165
01504 Antimicrobial resistance genes [BR:
alkm01504
]
NKI27_19165
Transporters [BR:
alkm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NKI27_19165
Antimicrobial resistance genes [BR:
alkm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NKI27_19165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UZE96141
LinkDB
All DBs
Position
4230447..4233569
Genome browser
AA seq
1040 aa
AA seq
DB search
MSNFFIDRPIFAWVLAILLTLMGVLSIKSLPVNQYPNVAPPAVAITLTYPGSAAQTVEDT
VTQVIEQQLNGLDGLRYISSESNGDGSMSIIATFDQGTNPDIAQVQVQNKLQKAMPLLPE
EVQRQGVRVNKYQRNFMLVFALISEDGRLDSSDLGDFIVSRLQDPVSRTSGVGDYQVFGS
PYAMRIWLDPDKLYAYQLTVQDVMAAIQAQNVQVSAGQLGGLPTRPGVQLSAAVMGKVRM
KSADEFAEILLKVNADGSQVRLSQVAEIGLGSENYSIAANYNGMAASGMALRLATGANLL
DTVAAVKATLAEQEAFLPQGVKIVYPFDTSPVVEASIQSVLMTLFEAVVLVFLVMFLFLQ
NLRATIIPTLAVPVVLLGTMSVLYMFGFTINVMTMFAMVLAIGLLVDDAIVVVENVERIM
TDEGLSARDATIKSMGQIQGALVGIGLVISAVFMPMIFFGGSTGVIYQQFAVTIITAMTF
SVLVALIFTPALCATILKSNGHSGPTTTGFFGWFNRLFDRTADRYKRGVGYMVLHKGRFL
LVYLLIVAGVVGLFRVLPTAFLPNEDQGVMIVMAQLPSNSSAEHTEEVLSEIQQYFMEHE
QDTVKGVMAVRGFNFAGRGQNSGILFVILNPFADRESVAKSVFALAGRTGARVSQIKDAI
AFPIVPPAILELGNATGFDFYLKDNAGAGHQNLMQALGQMLAKANQHPGLMMVRHNGLPD
EPQYQLLIDDEKARVLQVSLQEVNQTLSAAWGSTYVNDFIDKGRVKKVFVQGHMDARIGP
EDFDKWSVRNAEGQMVPFSAFSSGEWRYGSSRLQRYEGVPAVQIQGAPSPGTSTGEAMQI
LTELAKDLPHGITLEFTGLSFEERAAGSQTMMLYALAIIVVFLCLAALYESWTVPFSVIL
VIPIGVLGALTATLLRDLNNDVFFQVGLLTTMGLAAKNAILIVEFAKDLYDKQDRTLLEA
VTEAARLRIRPIIMTSLAFICGVIPLAIATGASSGSQHAIGTGVVGGTLAATFLAVFFVP
LFFAVISGVFSKKKNSTPAE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacttctttattgatcggcctatttttgcctgggttttggccattctattaacc
cttatgggcgtgctatcgatcaaaagcttgcccgttaaccagtatcctaacgttgcacct
cccgcagtggctattacacttacttatcccggctctgcggctcaaacggtagaagatacg
gttacccaagttattgagcagcaactcaacggtctagacggactgcgatatatctcttcg
gaaagtaatggcgatggcagtatgagtatcattgccacttttgatcagggtactaatcca
gatattgcacaagtacaggtacaaaataaactgcaaaaagccatgcctttgttgcctgaa
gaagttcagcgacaaggcgtgcgggtaaacaaataccaaaggaactttatgttggttttt
gccctcatttctgaagatggtcggttggattcttctgatctcggcgactttattgtttca
agattacaagatcccgtttcgcgtacttcaggggtgggtgactatcaagtattcggctca
ccctatgcgatgcgaatttggctcgatccagacaagctttatgcttatcaactaaccgta
caagatgtcatggccgctattcaagcgcaaaacgtacaagtgtctgcaggccagttaggc
ggtttacccactcgtccaggtgtgcagctttctgccgcagtaatgggcaaagtacgcatg
aaaagtgccgatgagtttgccgaaattctattaaaggttaatgccgacggctcacaagtt
cgcttatcacaagtcgctgaaattggacttggtagtgaaaactactcaatcgctgctaac
tataatggtatggccgcctctggcatggcgttacgcttagcaacaggcgcaaacttactc
gatacagtggcagcggttaaagcgaccttggccgagcaggaagcgtttttaccccaaggc
gtgaaaattgtttaccctttcgacacctcaccggtcgttgaagcctcaattcagtccgta
ctgatgacgctgtttgaagccgtggtactggtgtttttagtgatgttcctgtttttacaa
aacttgcgcgcaaccattattcctactctcgcagtgccagtggtactactaggaacaatg
tcagtgctatatatgtttggctttaccattaacgtaatgaccatgtttgcaatggtactc
gccatcggcctattggttgatgacgctattgttgtggtagaaaacgttgaacgaataatg
acagacgaaggcttatctgcgagagacgctaccatcaagtcgatggggcaaattcaaggt
gccttagtcgggatcggcctggtgatttcagcggtctttatgccgatgatctttttcggt
ggctcgacaggtgttatctatcaacagtttgcggtcaccatcatcactgcaatgaccttc
tcagtactcgttgcccttattttcactccggcactatgtgccaccatattaaaatccaat
ggtcacagtggcccaaccaccacagggttctttggttggtttaaccgattgtttgatcgc
acggccgatcgttacaagcgaggtgtcggttatatggtgctgcacaaaggccgttttcta
ctcgtttatttactgattgtggcaggggttgttggactattccgcgtattaccaactgcc
tttttacccaatgaagatcagggtgtaatgatcgtcatggcacaactgccatcaaactca
tcagctgaacataccgaagaagtactcagtgaaattcaacagtactttatggagcacgag
caagataccgttaagggcgtgatggccgtacgagggtttaactttgctggtcgaggccaa
aactctggcattttatttgttatcttaaacccttttgcagaccgagaaagcgtcgctaag
agtgtctttgcattggcaggtcgcacaggtgctcgggtttcgcaaatcaaagatgccatt
gcctttccgatagtgcctccagccattctagagctaggcaacgcgaccgggtttgatttt
tatcttaaagataatgctggagcagggcaccagaacctgatgcaagcattaggtcagatg
ctagccaaggccaatcaacacccaggtttgatgatggtgagacataatggtttacccgat
gagccgcaatatcaattattgattgatgatgaaaaagcccgcgtattacaagtctcgtta
caagaagtcaatcagaccttgtccgccgcttggggttctacctatgtaaatgattttatc
gataaaggacgagtgaaaaaagtctttgtacaaggtcatatggacgcccgtatcgggcca
gaagattttgataagtggtcagttagaaacgcagaaggccaaatggtgccattctcagct
ttctctagcggtgaatggcgttacggttcctctcgcttacagcgttatgaaggcgtacct
gcagtacaaattcaaggcgcgcctagcccaggtacgagtactggcgaagcgatgcaaata
ttaactgagctggcaaaagacctgcctcacggcatcactctagaatttacagggttgtcc
tttgaagaacgggctgcaggctcacaaaccatgatgctatatgcgttagccatcatcgtt
gtatttctatgcctagcggcgctttatgagagttggacagtgccattctcagtaatctta
gtcatccccattggggtgttaggtgcactgactgccaccttgctacgagacttgaacaat
gatgtctttttccaagtaggactgttaaccactatggggttagcggccaaaaacgccatc
ctaatcgtggagtttgcaaaagatctttatgataagcaagatcgaacactgttagaggcg
gttacagaagccgctagactgcgtattcgacctattatcatgacttcgctggcgtttata
tgtggtgttataccgctggccattgcaacaggtgcaagtagcggcagccaacatgccatt
ggtaccggtgtagtgggcggaacccttgcagctacgttcttggctgtattctttgtaccg
ttattttttgcagtgattagcggagtctttagcaagaaaaagaactccacgcctgctgag
taa
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