Alloactinosynnema sp. L-07: CRK58900 Help Entry CRK58900          CDS       T04489                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism alo  Alloactinosynnema sp. L-07 Pathway alo03030   DNA replication alo03410   Base excision repair alo03420   Nucleotide excision repair alo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:alo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CRK58900    03410 Base excision repair     CRK58900    03420 Nucleotide excision repair     CRK58900    03430 Mismatch repair     CRK58900  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:alo03032]     CRK58900    03400 DNA repair and recombination proteins [BR:alo03400]     CRK58900 Enzymes [BR:alo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CRK58900 DNA replication proteins [BR:alo03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CRK58900 DNA repair and recombination proteins [BR:alo03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CRK58900    NER (nucleotide excision repair)     GGR (global genome repair) factors      CRK58900    MMR (mismatch excision repair)     DNA ligase      CRK58900   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CRK58900 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia BRCT_2 HHH Motif Other DBs NCBI-ProteinID:  CRK58900 LinkDB All DBs Position I:complement(4111934..4114159) Genome browser AA seq 741 aa AA seqDB search MTSVDEDLPQEPKTAAVEGVEDVPAAERERHAELAEDLLGHQFRYYVLSAPTISDGEFDV LLRELEAIEERHPSLVTPESPSQRVGGTFSTEFRAVDHVERMLSLDNAFDSDELSAWVDR VEREVGSAAHFLCELKIDGLAINLLYENGRLTRALTRGDGRTGEDVTLNVRTMRDVPDRL TATDEFPVPALVEVRGEVFFKVEDFTELNARLVEAGKPPFANPRNTAAGSLRQKDPKVTA SRPLRMICHGLGKREGFEPVAQSEAYRALAAWGLPVSKHTKVLDTADQLASHIKYWGDHR HDADHEIDGVVIKVDEVALQRRLGTTSRAPRWAIAYKYPPEEATTTLLDIRVNVGRTGRV TPFAVMAPVKVAGSTVEMATLHNASEVKRKGVLIGDRVVIRKAGDVIPEVLGPVIEARPA DAREFEMPTECPVCGTTLAYEKEGDADIRCPNARSCPAQLRERLFHLAGRGAFDIEVLGY EAAAALLASGVISDEGDVFSLDEDKLGRVELFRTKAGELSANGRKLVANLDSAKDRPLWK VLVGLSIRHVGPTAAQALAREFGSIEVIATAGEQELADAEGVGPTIATSVREWFEVDWHR EVVEKWRSAGVRMAEERDESTPRTLEGLSIVVTGSLTTYSRDEAKEFIIARGGKASGSVS KKTAFVVVGDAPGSKYDKAIQLKVPVLDEDGFRALLEQGPESATALATIGDPNAPTADSP ADTPDTGDTNPAKEADKADDA NT seq 2226 nt NT seq  +upstreamnt  +downstreamnt gtgaccagtgttgacgaagatctcccgcaggagcccaagacggccgccgtcgagggcgtc gaggatgtgcccgccgcggagcgcgagcgccacgccgagctcgccgaggacctgctgggc caccagttccgctattacgtcctatccgctccgacgatctccgacggcgagttcgacgtc ctgctgcgcgagctggaggcgatcgaggagcggcacccgtcgctggtcacaccggagtcg cccagtcagcgcgtcggcggcaccttctccacggagttccgcgcggtcgaccatgtcgag cgcatgctcagtctggacaacgcgttcgactccgacgagctgagcgcctgggtcgaccgg gtggagagagaagtagggtcggccgcgcacttcctgtgcgagctgaagatcgacggcctg gccatcaacctgctctacgagaacggcaggctcacccgcgccttgaccaggggcgacggg cgcacgggtgaggacgtcacgctcaacgtccgcacgatgcgcgacgtgccggatcggctc accgcgaccgacgagttcccagttcccgcgctggtcgaggtgcgtggcgaagtgttcttc aaggtcgaggacttcaccgagctgaacgcccgcctggtcgaagcgggcaagcctccgttc gcgaacccgcgcaacaccgcggccgggtcgctgcggcagaaagacccgaaagtcaccgcg agcaggccgctgcggatgatctgccacggcttgggcaaacgcgagggcttcgaaccggtc gcgcaatccgaggcgtatcgggcgctggcggcgtgggggctgccggtgtcgaagcacacg aaggtcctcgacacggccgatcaactggcgtcgcacatcaagtattggggcgaccaccgc cacgacgccgaccacgagatcgacggtgtcgtgatcaaggtcgacgaggtcgcgctccaa cgcaggctgggcaccacctcccgcgcgccgcgatgggcgatcgcgtacaaatacccgccg gaagaggccacgaccacgctgctcgacatccgggtcaacgtcgggcgaaccggccgggtg acaccgttcgcggtgatggcgccggtcaaggtggccgggtcgacggtcgagatggccacc ctgcacaacgcctccgaggtcaagcgcaagggcgtgctgatcggcgaccgcgtggtcatc cgcaaggcgggcgacgtgatccccgaggtgctcggcccggtgatcgaggcccgccccgcc gacgcccgcgagttcgagatgccgaccgagtgccccgtctgcggcacgacgctggcctac gagaaagagggcgacgccgacatccggtgccccaacgcccggtcgtgcccggcccaactg cgcgagcggctgttccacctcgccgggcgcggtgcgttcgacatcgaggtactcggctac gaggccgccgccgcgctcctggcctccggcgtgatcagcgacgagggcgacgtgttctcg ctagatgaggacaagctcgggcgcgtggagttgttccgcaccaaggcaggcgagctgtcg gcgaacggccgcaaactggtggcgaacctcgactcggccaaagaccgtccactgtggaaa gtcttggtcggcctgtcgatccgccacgtcggccccaccgccgcccaggcactggcccgc gagttcggctccatcgaggtcatcgccaccgcgggcgaacaggaactggccgacgcggaa ggcgtaggcccgaccatcgccacctcagtccgcgagtggttcgaggtcgactggcaccgc gaggtcgtcgagaagtggcgctccgcgggcgtccgcatggccgaggaacgcgacgagtcg acaccccggacgttggagggcctgtcaatcgtcgtgaccggcagcctgacgacgtactcg cgggatgaggccaaggaattcatcatcgcccgcggcggcaaggcgtctggctcggtctcg aagaagacagcgttcgtggtcgtcggcgacgccccgggatcgaagtacgacaaggccatt caactcaaggtcccagtcctggacgaggacggcttccgcgccctgctggaacaaggcccc gaatccgccaccgccctcgccacaatcggcgacccgaacgccccgacggccgactcgcct gcggacacccctgacacaggggacacgaacccagcgaaggaggcggacaaggcagacgac gcatga

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