Alteromonas sp. I4: AltI4_28820
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Entry
AltI4_28820 CDS
T10627
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
alto Alteromonas sp. I4
Pathway
alto03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AltI4_28820 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_28820 (nth)
Enzymes [BR:
alto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AltI4_28820 (nth)
DNA repair and recombination proteins [BR:
alto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AltI4_28820 (nth)
Prokaryotic type
AltI4_28820 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BBO28494
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All DBs
Position
3297819..3298523
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AA seq
234 aa
AA seq
DB search
MTKQQKVQAIMDILDELYPEIPIPLDHKDPYTLLIAVLLSAQCTDERVNQITPKLFARAD
NPFDMVLMSIDEIKEIIKPCGLSPMKSKGIWHLSDMIIKQHGGEVPQDFEALEAMPGVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPRERWNDLHLQI
IYYGREYCPARGFSLDKCIITRQFGRKSFINEVLKEQEKKLQAKQKKTVKKPKK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaaacaacaaaaagtacaagccattatggacattctggatgagctttatccggaa
attcccattccattggatcacaaagacccgtacacacttctgatagcggtgctgctgtct
gcgcaatgcacagatgaacgagtaaaccagatcacccctaaattgtttgcccgggccgat
aacccctttgacatggtgctcatgagcatcgatgaaatcaaagagatcatcaaaccctgc
ggattgtccccgatgaaatcaaaagggatttggcatctgtctgatatgatcatcaagcaa
catggcggtgaagtaccacaagactttgaggcgttggaagccatgcccggtgtcggtcac
aagaccgcatctgtggtaatgtcccaggcatttggtgttcccgcctttccggttgatacc
catattcaccgacttatgtatcgctgggggttgtcgaacggtaagagtgtggagcaaacc
gagcgcgatgcaaaacgcctgttcccacgagaacgctggaatgacctgcatttgcaaatc
atttattacggccgagagtattgccctgcacggggtttctcgctggacaaatgcataatt
actcgccaatttggccgcaaaagttttattaacgaagtactgaaagagcaggaaaaaaag
ctacaggcaaagcaaaagaaaaccgtcaaaaagccaaaaaaatag
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