Allochromatium vinosum: Alvin_1334 Help Entry Alvin_1334        CDS       T01168                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism alv  Allochromatium vinosum Pathway alv03030   DNA replication alv03410   Base excision repair alv03420   Nucleotide excision repair alv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:alv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Alvin_1334    03410 Base excision repair     Alvin_1334    03420 Nucleotide excision repair     Alvin_1334    03430 Mismatch repair     Alvin_1334  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:alv03032]     Alvin_1334    03400 DNA repair and recombination proteins [BR:alv03400]     Alvin_1334 Enzymes [BR:alv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Alvin_1334 DNA replication proteins [BR:alv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Alvin_1334 DNA repair and recombination proteins [BR:alv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Alvin_1334    NER (nucleotide excision repair)     GGR (global genome repair) factors      Alvin_1334    MMR (mismatch excision repair)     DNA ligase      Alvin_1334   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Alvin_1334 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia HHH UPF0758_N HHH_3 PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  ADC62271 UniProt:  D3RSW2 LinkDB All DBs Position 1528336..1530426 Genome browser AA seq 696 aa AA seqDB search MTSSAITQRIEALRAEIRYHNHRYYVLDDPEIPDAEYDRLFAELQQLEAEHPALITPDSP TQRVGAEPRPELGEVRHAVPMISLDNAMSDERLVEFHRRLTVALPEFDPVLYTAEPKFDG LAITLRYESGVLVLAATRGDGTRGEDVTHNARTIPNVPLRLLGEDWPEVLEVRGEVYMPR AGFDRLNARLEERGERPFANPRNAAAGSLRQLDPRVTARRPLRFCAYGWGEIAGEPGESQ FEMLQRLAGWGLPISPELRQVAGLDGCRDYFEALGRRRATLDYDIDGVVFKLDRLSAQTA LGATAHHPRWAIARKFPAQEALTEVEAVEFQVGRTGAVTPVARLRPVQVGGVTVSKATLH NLDEVRRKDVRIGDSVYIRRAGDVIPEIVRVLVERRPDGARLVELPTQCPVCGSDVIRPE GEAVARCSGGLWCPAQRKEAIRHFAARRALDIEGLGEKLIEQLVDLEWVREPADLYRLTA DRLALLERMGEKSAANLIAALEHSKRTTLARFVFALGIREVGETTAQLLAEHVGGIEALM AASVEDLVAIKGIGPVVAAHIVGFMAQAHNREAIAHLLAAGIHWPEVERSDSMPAEPSAA PLTGKTFVITGTLSRPREEFAARLQGLGAKVTGSVSKKTDYLLAGAEAGSKLAKAEALGV VVIDEAGLESLIARLQALHGDDGRSDTPQPGALADD NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt gtgacgtcctccgccatcacccagcgcatcgaggcgctgcgcgccgagatccgctatcac aatcatcgctactacgtactcgacgatcctgagatcccggacgccgagtacgaccgcctg ttcgccgagctccagcagctggaagccgaacaccccgctctgatcacgcccgattcgccc acccagcgcgtcggcgccgagccgcgtccggagttgggcgaggttcggcacgctgtcccc atgatctcgctcgacaatgcgatgagcgatgagcggctggtggagttccatcgtcgtctc acggttgcgctgcctgaattcgatcctgtgctctacaccgccgagccgaagttcgacggg ctggcgatcacgctgcgctatgaatccggggtgctggtgctggccgcgacccgtggcgac ggcacgcgcggcgaggacgtgacccacaacgcgcggaccattccgaacgtgccgttgcgg cttctcggtgaggactggcccgaggtgctggaggtgcgcggcgaggtctacatgccgcgt gccggattcgaccggctcaacgcgcgtctggaggaacgcggcgagcgtcccttcgccaat ccgcgcaatgccgccgccggcagtctgcgtcagctcgatccgcgcgtcaccgcccgtcgg ccgctgcgtttctgcgcctatggctggggcgagatcgcgggcgagccgggcgagagtcag ttcgagatgctccagcgtctggctggctgggggctgccgatctcgcccgagctacggcag gtggcgggactcgatggctgtcgcgactatttcgaggctttgggacggcggcgcgcgacg ctcgattacgacatcgacggcgtggtcttcaagctcgaccggctgtcggcgcagacggcg ctcggggccacggcgcatcatccgcgctgggccatcgcgcgcaagtttccggctcaggag gcgctgaccgaggtcgaggcggtcgagtttcaggtcgggcgcacgggggccgtgacgccg gtggcgcggctgcgtccggtgcaggtcggcggggtgaccgtctccaaggcgacgctgcac aatctcgacgaggtgcggcgcaaagacgtgcgcatcggcgacagtgtctacatccgccgt gcaggtgacgtgatccccgagatcgtgcgggtgctcgtcgagcggcgtccggacggggca cggctggtcgagctgccgacccagtgtccggtctgcggttcggacgtgatccggccggag ggcgaggcggtcgcgcgctgtagcggcggactctggtgtccggcccagcgcaaggaggcg atccggcattttgccgcgcgccgggcgctggacatcgaggggctgggcgagaagctcatc gagcagctcgtcgatctggagtgggtgcgtgagccggccgatctctatcgtctgaccgcc gaccgcttggctttgttggagcgcatgggcgagaagtcggcggccaatctgatcgcggcc ctggagcacagcaaacgcacgacgctggcgcgcttcgtcttcgcgctcggcatccgcgag gtcggcgaaaccacggcgcagctgctggcggaacacgttggcgggatcgaggcgctgatg gccgcgagcgtcgaggatctggtcgcgatcaagggtatcgggcctgtggtggcggcgcac atcgtcggcttcatggcccaggcgcacaatcgcgaggcgatcgcgcatctgctggcggcc ggcattcactggcccgaagtcgagcgctccgattcgatgcccgccgagccgagcgcggcg cccctgaccggcaagaccttcgtcatcaccggcaccctcagtcgtccgcgcgaggaattc gcggcccggttgcagggactcggcgccaaggtgacgggcagtgtctccaaaaagaccgat tatctgctggcgggcgcggaagccggctcgaagctcgccaaggccgaagccctgggtgtg gtcgtgatcgacgaggccggactcgaatccttgatcgcgcggctccaggcgctacatgga gacgatggccgttcagacacaccgcaaccgggagcactcgctgatgactga

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