Arabidopsis lyrata (lyrate rockcress): 9300569
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Entry
9300569 CDS
T01578
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00906
Carotenoid biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
9300569
Enzymes [BR:
aly01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
9300569
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Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
9300569
NCBI-ProteinID:
XP_002864493
UniProt:
D7MM97
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MECVGARNFAAMAVSTFPSWSSRRKFPVVNRYSFRNIRFGLCSVRASGGGSSGSESCVVV
REDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAG
LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRDTIVYLDDDNPI
TIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLA
TVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPEQMVFMDYRDYTNEKVRSLE
AEYPTFLYAMPMTKTRLFFEETCLASKDVMPFDLLKKKLMLRLDTLGIRILKTYEEEWSY
IPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILEQETQTTSFT
KQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPKWMWQGF
LGSTLTSGDLVLFALYMFIISPNNLRKGLINHLISDPTGATMIKTYLKV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttggggctcggaatttcgcagcaatggcggtttcaacatttccgtcatgg
agttctcgaaggaaatttccggtggttaatagatacagctttaggaatattcgtttcggt
ttatgtagtgtcagagctagcggcggcggaagctccggtagtgagagttgtgtggtggtg
agagaagatttcgccgacgaagaagattttgtgaaagctggtggttctgagattctattc
gttcaaatgcagcagaacaaagatatggatgaacagtctaagcttgttgataagttgcct
cctatatcaattggtgatggtgctttggatctagtggttattggttgtggtcctgctggt
ttagccttggctgcagaatcagctaagcttggattaaaagttggactcattggtccagat
cttccttttactaacaactacggtgtttgggaagatgaattcaatgatcttgggttgcaa
aaatgtattgagcatgtttggagagatactattgtgtatctggatgatgacaatcctatt
accattggccgtgcttatggaagagttagtcgacgtttactccacgaggagcttttgagg
aggtgtgtcgagtcaggtgtctcgtaccttagctcgaaagttgacagcataacagaagct
tctgatggtcttagacttgttgcttgtgacgacaataacgtcattccgtgcagacttgcc
actgttgcttctggagcagcttcgggaaagctcttgcaatacgaagttgggggacctaga
gtctgtgtccaaactgcatacggcgtggaggttgaggtggaaaacagtccatatgatcca
gagcaaatggttttcatggattacagagattatacgaatgagaaagttcggagcttagaa
gctgagtatccaacgtttctgtacgctatgcctatgacaaagacaagactattctttgag
gagacgtgtttagcctcaaaagatgtcatgcccttcgatttgctaaaaaagaagctcatg
ttaagattagatacactcggaattcgaattctaaagacttacgaagaggaatggtcctat
atcccagttggtggttccttgcctaacaccgaacaaaagaatctcgcctttggtgctgcg
gctagcatggtacatcccgcaacaggctattcagttgtgagatctttgtctgaagctcca
aaatatgcatcagtcatagcggagattctagaacaagagactcagactacttccttcacc
aaacagatcaatagtaatatttcaagacaagcttgggatactttatggccaccagaaagg
aaacgacaaagagcattctttctctttggtcttgcactcatagttcaattcgataccgaa
ggcattagaagcttcttccgtactttcttccgccttccaaaatggatgtggcaagggttt
ctaggatcaacattaacatcaggagatcttgttctctttgctttatacatgttcatcatc
tcaccaaacaatttgagaaaaggtctcatcaatcatctcatctctgatccaaccggagca
accatgataaaaacctatctcaaagtatga
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