Arabidopsis lyrata (lyrate rockcress): 9300804
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Entry
9300804 CDS
T01578
Name
(RefSeq) transcription factor PIF7
KO
K16189
phytochrome-interacting factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
9300804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9300804
Transcription factors [BR:
aly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
9300804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
bHLH_SAC51
bHLH_LHW
HAD_SAK_1
RNA_pol_Rbc25
bHLH_NPAS4
P22_portal
Motif
Other DBs
NCBI-GeneID:
9300804
NCBI-ProteinID:
XP_020871149
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MSNYGVKELTWENGQLTVHGLGEEVEPTTSNNPIWTQSLNGCETLESVVHQAALQQPSKL
QLQSPMLSPNHNYESKDGSCSRKRGYPQEMDGMDRWFAVQEESHRVGHSVTASDSGTNMS
WASFESARSLKTARTGDRDYIRSGSETQDTEGDEQETRGEAGRSSGRRGRAAAIHNESER
RRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIPQ
LPPPQSVLSIQHQQQQQQQQQQQQQQFQMSLLATMARMGMGGGGNGYGGLVPPPPPPPLM
VPPMGNRDCTNGSSATLTDPYSAFFAQTMNMDLYNKMAAAIYRQQSDQSTKVNTGMPSSS
SNHEKRD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattatggagtgaaggagctcacatgggaaaatgggcaattaaccgttcatggt
ctaggcgaagaagtcgaaccaaccacctcgaataaccctatttggacccaaagtctcaac
ggatgtgagactttggagtctgtggttcatcaagcggctcttcagcagccaagcaagctt
cagctacagagtcctatgttatctccaaaccacaattatgagagcaaggatggatcttgt
tcaagaaaacgcggttatcctcaagaaatggacggtatggaccgatggttcgctgttcaa
gaggagagccatagagttggtcacagcgtgactgcaagtgatagcggtaccaatatgtct
tgggcgtcttttgaatctgctcggagcttgaagacagctagaaccggagacagagactat
atccgctctggatcagaaactcaagatactgaaggagatgaacaagagactaggggagaa
gcagggagatctagtggacgacggggacgagcagcagcgattcataacgaatccgaaagg
agacggcgtgataggataaaccagaggatgagaacacttcaaaagctgcttcctactgca
agtaaggcggataaagtctcgatcttggatgatgtgatcgaacacttgaaacagctacag
gcgcaagttcagtttatgagcctaagagccaatctgccacaacaaatgatgattccgcaa
ctacctccaccacagtcagttctcagcatccaacaccaacagcaacaacagcagcaacaa
caacaacagcagcaacagtttcagatgtcgttgcttgcaacaatggcgcgaatgggaatg
ggaggcggtggaaatggttatggaggtttagttcctcctcctcctcctccaccattgatg
gtccctcctatgggtaacagagactgcaccaacggttcttcagccactttaactgatccg
tacagcgccttttttgcacagacaatgaatatggatctctacaataaaatggctgcagcg
atctatagacaacagtctgatcaatcaacaaaggtaaataccggcatgccctcaagttct
tcgaatcacgagaaaagagattag
DBGET
integrated database retrieval system
