Arabidopsis lyrata (lyrate rockcress): 9301589
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Entry
9301589 CDS
T01578
Name
(RefSeq) BRCA1-A complex subunit BRE
KO
K12173
BRCA1-A complex subunit BRE
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9301589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9301589
03036 Chromosome and associated proteins [BR:
aly03036
]
9301589
03400 DNA repair and recombination proteins [BR:
aly03400
]
9301589
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
9301589
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
9301589
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
9301589
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
9301589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
Lin-28A-like_zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
9301589
NCBI-ProteinID:
XP_002865515
UniProt:
D7MSR1
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MAFEGLPPLIADQLHYLLNHSPDSIKIENVWSGNKINPKILDRFTLVIPYCLETIKWDVI
YNSEYPVDPPDFVFGPDDEDFMPCSAIAPDDDQISSLKKALSQWDNEDSTRLLVIIQGLR
DQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNINK
MVAGCPWKHQQKIYLQVVYPILRKYESAPSTPRLKLVSSSDLKALFSVEDVKLPPWMDGM
CLAEYLPHLEETLERQMEEAVSAIDLRRSFIETLTLFLGRPLEADPTFCRKATFLTASGQ
FTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLFTEYPWSPRWEVGRMAERLCD
FLTDETVNFKKYCNEALLQH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgaaggactcccacctctaatcgctgaccagctccactacttactcaatcac
tcgcctgattccatcaagatcgaaaatgtctggtctggtaacaagattaatcccaagatt
ctcgatcgctttactttggtgataccttattgtctagagactatcaaatgggatgttatt
tacaattcagagtatccagtggatcctcctgatttcgtattcggaccagacgacgaagat
tttatgccgtgtagtgctattgctcctgatgatgatcagatatcatcattgaagaaggct
ttgtcccagtgggataacgaggactcgacgcggttacttgttatcattcaaggattgagg
gatcaatatgtggcataccaaagaaggcgtgtgggccaagttgatgatgatcgcgtgaag
tttgagattagcaccgttttaactcgcaagggaattgaaatgcaaatggcttcaggagtt
gacaagccagaggaagtcaagtttgcagtacctcttgtgatggatatgaacataaacaaa
atggtagcgggctgtccttggaagcatcagcagaagatttatcttcaggtagtatacccg
attcttcgaaaatatgaatctgcaccttcgacacctcgtttgaaattagtatcatcttct
gatttaaaagctctattctctgttgaggatgttaaacttcctccatggatggacgggatg
tgcttggctgaatatcttcctcatctcgaagaaactcttgagagacaaatggaggaagct
gtttctgcaattgatttaaggaggagttttattgagactttgactctttttcttggaaga
cctcttgaagctgatcctaccttttgccgtaaggctacattccttactgcctctggacaa
tttactttcatggttcatttcttcttttcaactcaatttccgaagcagcaaccaacccta
atgcttcagagttgtcagcatttaaaccaatcgagcgtgccggtaaaatcaaacctcttc
actgagtacccatggagtccaagatgggaagtggggcgcatggctgagagactgtgtgac
ttcctgaccgacgagactgtcaacttcaaaaaatattgtaacgaagctctactccaacat
tag
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integrated database retrieval system