KEGG   Arabidopsis lyrata (lyrate rockcress): 9301589
Entry
9301589           CDS       T01578                                 
Name
(RefSeq) BRCA1-A complex subunit BRE
  KO
K12173  BRCA1-A complex subunit BRE
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    9301589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9301589
   03036 Chromosome and associated proteins [BR:aly03036]
    9301589
   03400 DNA repair and recombination proteins [BR:aly03400]
    9301589
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    9301589
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   BRISC complex
    9301589
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     9301589
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     9301589
SSDB
Motif
Pfam: BRE Lin-28A-like_zf-CCHC_2
Other DBs
NCBI-GeneID: 9301589
NCBI-ProteinID: XP_002865515
UniProt: D7MSR1
LinkDB
Position
Unknown
AA seq 380 aa
MAFEGLPPLIADQLHYLLNHSPDSIKIENVWSGNKINPKILDRFTLVIPYCLETIKWDVI
YNSEYPVDPPDFVFGPDDEDFMPCSAIAPDDDQISSLKKALSQWDNEDSTRLLVIIQGLR
DQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNINK
MVAGCPWKHQQKIYLQVVYPILRKYESAPSTPRLKLVSSSDLKALFSVEDVKLPPWMDGM
CLAEYLPHLEETLERQMEEAVSAIDLRRSFIETLTLFLGRPLEADPTFCRKATFLTASGQ
FTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLFTEYPWSPRWEVGRMAERLCD
FLTDETVNFKKYCNEALLQH
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggcgttcgaaggactcccacctctaatcgctgaccagctccactacttactcaatcac
tcgcctgattccatcaagatcgaaaatgtctggtctggtaacaagattaatcccaagatt
ctcgatcgctttactttggtgataccttattgtctagagactatcaaatgggatgttatt
tacaattcagagtatccagtggatcctcctgatttcgtattcggaccagacgacgaagat
tttatgccgtgtagtgctattgctcctgatgatgatcagatatcatcattgaagaaggct
ttgtcccagtgggataacgaggactcgacgcggttacttgttatcattcaaggattgagg
gatcaatatgtggcataccaaagaaggcgtgtgggccaagttgatgatgatcgcgtgaag
tttgagattagcaccgttttaactcgcaagggaattgaaatgcaaatggcttcaggagtt
gacaagccagaggaagtcaagtttgcagtacctcttgtgatggatatgaacataaacaaa
atggtagcgggctgtccttggaagcatcagcagaagatttatcttcaggtagtatacccg
attcttcgaaaatatgaatctgcaccttcgacacctcgtttgaaattagtatcatcttct
gatttaaaagctctattctctgttgaggatgttaaacttcctccatggatggacgggatg
tgcttggctgaatatcttcctcatctcgaagaaactcttgagagacaaatggaggaagct
gtttctgcaattgatttaaggaggagttttattgagactttgactctttttcttggaaga
cctcttgaagctgatcctaccttttgccgtaaggctacattccttactgcctctggacaa
tttactttcatggttcatttcttcttttcaactcaatttccgaagcagcaaccaacccta
atgcttcagagttgtcagcatttaaaccaatcgagcgtgccggtaaaatcaaacctcttc
actgagtacccatggagtccaagatgggaagtggggcgcatggctgagagactgtgtgac
ttcctgaccgacgagactgtcaacttcaaaaaatattgtaacgaagctctactccaacat
tag

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