Arabidopsis lyrata (lyrate rockcress): 9302623
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Entry
9302623 CDS
T01578
Name
(RefSeq) 4-coumarate--CoA ligase-like 9
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00130
Ubiquinone and other terpenoid-quinone biosynthesis
aly00940
Phenylpropanoid biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
aly_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
9302623
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
9302623
Enzymes [BR:
aly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
9302623
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Motif
Pfam:
AMP-binding
AMP-binding_C
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
9302623
NCBI-ProteinID:
XP_002866551
UniProt:
D7MP05
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MQTKNNDSRSIDRSSGFDQRTGIYHSLRPSLSLPPIDQPLSTAEFVLSLLRKSSPPATAG
KNIEALTFLVNSSSGDSLTYGELLRGVRSLAVSLRERFPSLSSKNVAFILSPPSLHIPVL
YLALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLRSSSFPLGIVLMDSP
EFLSWLNRSDASSVNPFQVRVHQSDPAAILFSSGTTGRVKGVLITHRNLIASTAVSHQRT
LQDPVDYDRVGLFSLPLFHVFGFTMMIRAISLGDTLVLLGRFELEAMLKAVEKYKVTGMP
VSPPLIVALVKSELTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVEIVQGYGLTESS
GPAASTFGPEETVKYGSVGRISENLEAKIVDPSTGEALPPGKTGELWLRGPVIMKGYVGN
EKASAETVDEEGWLKTGDLCYFDAEGFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDV
IDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVAPYKKVRRVAFINAIPKN
PAGKILRRELTKIAVDGNASKL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaaaaacaacgacagccgttcgattgaccggagctccggcttcgatcaacgg
acaggaatttatcatagtcttcgcccttctctttctctacctcctatagatcaacctctc
tccaccgccgaattcgtactttctctgctccgcaaatcctcaccaccagccaccgccggg
aaaaacattgaagccttaaccttcctagttaactcgagctctggtgatagcctcacttat
ggagagcttcttcgtggagttcgttctcttgctgtatctctccgggagcgatttccttct
ctttcctcaaaaaatgtcgcttttatcctctctccaccttcgctgcacataccagtgctt
tacttagctttaatgtcgatcggtgttgttgtttcaccggcgaacccaatcggatctgaa
tcagaggtgagtcatcaggttgaagtcagtgaaccagtaattgcgttcgcgacatcgcag
acggttaagaagcttcggtcctcatctttccctctcggaatcgttctgatggactcgcct
gagtttctctcctggttaaatcgatcggatgcttcatcggttaatccatttcaggttcgg
gtccaccaatcggaccctgccgcaatcctcttttcgtctggcacaaccgggcgggtcaaa
ggcgttttgatcactcaccgtaacctaattgcctcgaccgccgtgtctcaccaacggact
ctccaagatccggttgattatgatcgcgttggactgttctcgcttccgctcttccacgtg
tttggcttcacgatgatgattcgagccatctcgcttggagacacgctggtgcttttaggg
agattcgagcttgaggcgatgttaaaggcggtggagaaatataaggttactggtatgcct
gtatctcctccgttgattgtagcattggtcaaatcggagctaacgaagaagtacgatctc
cggtcgttgcgttctcttggctgcggcggcgctccactcggcaaagacatcgcagagagg
ttcaagcagaaattcccagatgtggaaattgtacagggctatggcttgacggagagctcg
gggccagctgcgtcaacttttggacctgaagagacggtaaaatatggctcagttggtcgt
atctctgagaatttggaagccaaaattgttgatccatccaccggagaagccttgccaccg
ggaaaaaccggtgaactatggctccgaggaccagtcatcatgaaaggttatgtgggaaac
gagaaagcgagtgcggagacagtagacgaagaagggtggttaaagactggtgatctctgt
tattttgatgcggaaggttttctgtatattgttgatcggctaaaggaactaatcaaatac
aaggcttatcaggttccaccggtagagttggagcagattcttcactcgaatccagatgtg
attgatgctgcagttgttccgttccctgacgaggatgcaggagagattccaatggctttc
atagtgagaaaaccaggaagcaatctcaacgaagcgcaaatcattgatttcgtagctaaa
caagttgctccgtacaagaaggtaagacgagttgctttcataaatgcaatcccaaaaaat
cctgctggcaagattctgcgtcgggaacttactaaaatcgccgtggatggcaatgcatca
aagctttga
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