Arabidopsis lyrata (lyrate rockcress): 9305190
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Entry
9305190 CDS
T01578
Name
(RefSeq) xanthine dehydrogenase 1 isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00230
Purine metabolism
aly00232
Caffeine metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01232
Nucleotide metabolism
aly04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
9305190
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
9305190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9305190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9305190
Enzymes [BR:
aly01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
9305190
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
9305190
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of breast milk
9305190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
Fer2_2
CO_deh_flav_C
Fer2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
9305190
NCBI-ProteinID:
XP_020874608
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MGSLKKDGEIGDEFTEAILYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEGGCGA
CTVMVSSYDRNSKTCVHYAVNACLAPLYSVEGMHVISIEGVGHRKLGLHPVQESLASSHG
SQCGFCTPGFIMSMYSLLRSSKNSPCEEEIEECLAGNLCRCTGYRPIVDAFRVFAKSDDA
LYCGVSSLSLQDGSNICPSTGKPCSCGSKTTNEVASCNEDRFQSISYSDIDGAKYTEKEL
IFPPELLLRKLATLKLRGNGGLTWYRPVSLQNLLELKANFPDAKLLVGNTEVGIEMRLKR
LQYQVLISVAQVPELNALNVSDNGIEVGSALRLSELLRLFRKLVKERPAHETSACKSFIE
QLKWFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRITNCNGVVRSIPAKDFFLG
YRKVDMGSKEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEEKGQQLFVS
DASIAYGGVAPLSLCARKTEEFLIGKNWNKDLLQDALRVIQSDVLIKEDAPGGMVEFRKS
LTLSFFFKFFLWVSHNVHNVNSAIETFPPSHMSAVQPVPRLSRIGKQDYETVKQGTSVGS
SEVHLSARMQVTGEAEYTDDTPVPPNTLHAAFVLSKVPHARILSIDDTAAKSSSGFVGLF
LAKDIPGDNMIGPIVPDEELFATDVVTCVGQVIGVVVADTHENAKTAAGKVDVRYEELEA
ILSIKEAINAKNFHPNTQKRLRKGDVELCFQSGQCDRIIEGEVQMGGQEHFYLEPNGSLV
WTVDGGSEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAA
ASVPSYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFTNEGKILALDLEIYNNGGNSL
DLSLSVLERAMFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIA
AELDKSPEEIKEMNFQVEGSVTHYSQSLQHCTLHQLWKELKVSCNFLKARREADEFNSHN
RWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA
SAFNIPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHNFN
TFAELVSACYFQRIDLSAHGFHIVPDLGFDWISGKGNAFRYYTYGAAFAEVEIDTLTGDF
HTRAADIMLDLGYSLNPAIDVGQIEGAFIQGLGWVALEELKWGDAAHKWIKPGSLLTCGP
GNYKIPSINDMPFNLNVSLLKGNPNTKAIHSSKAVGEPPFFLATSVFFAIKEAIKAARTE
VGLTDWFPLESPATPERIRMACFDEFSAPFVSSDFYPNLSV
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgggttcactgaaaaaggacggagagatcggagacgagtttacggaggcgatactatac
gttaatggcgttcgtagagtcttgcctgatggattggctcatatgacacttctcgaatat
ctcagagatttaggattgaccgggactaagcttggctgcggcgaaggtggttgtggggct
tgcacggtgatggtttctagttatgatagaaattcaaagacatgtgtgcattatgctgtc
aatgcttgcctagcgcctctctattctgtagaagggatgcatgtaatatccatcgaggga
gttgggcatcgcaaacttggcttgcaccctgtgcaggagtctttggcatcttctcatggt
tcccaatgtgggttttgtactcccggatttatcatgtcaatgtattcgttattgaggtca
agtaaaaactcaccttgtgaggaggagattgaagaatgtcttgcaggaaatctatgtcgt
tgtactggttatcgacccattgttgatgcgtttcgggtttttgcaaaatctgatgatgct
ctctactgtggtgtatcttcacttagccttcaggacggttcaaatatttgcccatctact
ggcaagccttgttcttgtggatcaaaaacaactaatgaagtggccagttgtaatgaagat
agatttcagtcaatctcttatagtgatatagatggagctaagtatacagaaaaggagctt
attttcccccctgaacttttgctgaggaagttagctaccttaaagttaagggggaatggg
gggcttacctggtatagacccgtaagtcttcagaacttgcttgagctcaaagcaaatttt
cctgatgcaaaactactggtaggtaatacggaggtgggaatcgaaatgagactgaagagg
ttacagtatcaggtgctaatctctgtagctcaagtcccagaactcaatgcgttgaatgtc
agtgacaatgggatagaggttggttcagctttgagactttctgaactcctgaggttattc
aggaagctagtaaaggagcgtcctgcacatgaaacatcagcatgcaagtcttttatcgaa
cagctgaagtggtttgctgggacacaaataagaaatgttgcttgcattggtggaaacatc
tgtacagctagtccaatatctgatttaaatcctctttggatggcttcaagagcagagttt
cggataactaactgcaatggagttgttagatctatacctgcaaaagatttcttccttggt
taccgtaaagtggatatggggagcaaagagatcttgttgtcggtattccttccatggaca
aggcccttagagtatgtgaaagaatttaagcaggcccatcgcagggatgatgatatagct
attgtcaatggtggaatgcgtgtgtttcttgaagagaagggacaacaattgttcgtttct
gatgcatccattgcctacggaggtgtggctccactttccttgtgtgcgagaaagactgaa
gaatttctaattggaaagaattggaataaagatcttctgcaagatgcgcttagggtcata
cagagcgatgtcttgattaaggaagatgctcctgggggaatggtggagtttcggaaatct
ctaaccctaagcttcttctttaaatttttcttatgggtttctcataatgtacataatgta
aattctgcgatagagaccttcccaccctcccatatgtcagctgttcaacctgttcctcgg
ttatctagaattggaaagcaagactatgagacagtaaaacagggaacatctgttggctcg
tcggaggtccatctttcagcgagaatgcaggtcacaggggaagcagaatatactgatgat
accccagtacctcctaataccttacatgctgcctttgtgctaagcaaagtgccacatgcc
cgcatcctttcaattgatgatacggcagccaaatcttcatctggttttgttggtctgttt
cttgccaaagatattcctggggataatatgattggaccaattgttcccgacgaagaatta
tttgctacagatgtggtcacgtgtgtgggacaagtcattggtgtggttgtcgcggatacg
catgaaaatgcaaaaactgcagcaggaaaagttgacgttaggtatgaggaactagaagcg
atattatcaatcaaggaggcgattaatgctaaaaatttccatccgaacacacagaaaagg
ctaagaaaaggggatgtcgagttgtgctttcaatctggtcagtgtgacaggataatagag
ggagaggttcaaatgggtggtcaggaacacttttacttggagcctaatggtagtttggtt
tggacagtagatggaggcagcgaagttcatatgatttcatccacacaggctcctcaaaag
caccagaaatatgtgtcccatgttcttggtcttccgatgtccaaagtggtatgcaaaacc
aaacgaattggtggtggctttggtggtaaagaaacaagatcagctttcattgctgctgca
gcttctgttccttcctatctattgaatcgacccgtgaaactcatactggacagagatgtg
gacatgatgataactggtcatcgtcatagtttccttggaaagtacaaggttggatttacg
aacgaaggaaaaatattggccttagaccttgaaatctacaacaatggtggaaactctttg
gatctctccctttctgttcttgaacgtgccatgtttcactcggataacgtttatgagatc
ccgcatgtaaggattgtagggaacgtttgctttactaattttcccagcaacactgctttc
cgagggtttggaggcccccaaggtatgcttataacagaaaactggatccaaagaatcgca
gcggagcttgataaaagccctgaagaaatcaaagagatgaactttcaagtggaaggatca
gtcacacattactctcagtctcttcagcactgcacgctgcatcagctctggaaagagctg
aaagtatcctgcaacttcttaaaggcccgcagagaagctgacgaatttaatagtcataac
cggtggaaaaagcgtggtgtagctatggttcccacaaaatttggcatatcatttaccaca
aagttcatgaatcaggctggagctcttgttcatgtttacacggacgggactgttttggtg
actcatggaggtgtggagatgggtcaaggattgcatacaaaggtcgctcaagttgctgcg
tccgcctttaacattccacttagttcagttttcgtgtcagagacaagcactgacaaggtt
cctaatgcgtcaccaactgctgcttctgcgagctctgatatgtatggtgctgcagtttta
gacgcttgtgagcagattatagcaagaatggaacctgttgcatctaagcacaatttcaac
acatttgctgagctagtaagtgcctgctactttcaacggatagacctatcagctcatggt
tttcacattgttcctgatcttggatttgactggatatctggaaaagggaatgcctttaga
tattacacatatggagctgcctttgctgaagttgagatagatacattaactggtgatttc
cacacaagagcagctgatataatgttggacctcgggtattctcttaacccagccattgat
gttggacaaatagaaggagcgtttatacaaggacttggttgggtagctttagaagaactc
aaatggggagatgcagctcataaatggattaaaccaggaagtttactcacttgtggaccc
ggaaactacaagataccttccatcaacgacatgccgttcaacctcaatgtttctcttctc
aagggaaatccaaatacaaaggcaatacattcatctaaagcagtgggtgagccaccattc
tttcttgcaacatcggttttctttgcgataaaggaagctattaaagcggctagaaccgag
gtgggtctcacagactggttccctctagagagtccagccacgccagagcgtatcaggatg
gcttgtttcgacgagttttcagctccttttgtaagttcagatttctaccctaatcttagt
gtttag
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