Arabidopsis lyrata (lyrate rockcress): 9305317
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Entry
9305317 CDS
T01578
Name
(RefSeq) tocopherol cyclase, chloroplastic
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00130
Ubiquinone and other terpenoid-quinone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
9305317
Enzymes [BR:
aly01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
9305317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
9305317
NCBI-ProteinID:
XP_020874882
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MEIRSLIVSMNPNFSSFELSRPVTRSLRSTKLVPRSISRVSASISTPASDTDKISVKPVY
VPTPPNRELRTPHSGYHFDGTARKFFEGWYFRVSIPDKRESFCFMYSVENPAFRQRLSPL
EVALHGPRFTGVGAQILGANDKYLCQYTQESHNFWGDRHELVLGNTFSAVPGANSPNKEV
PPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRPVYGWGDVGAKQKS
TAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQ
CNVFEGASGEVALTAGGGLRQLPGLTETYENAALVCVHYDGKLSEFVPWNGVVRWEMSPW
GYWYITAENETHMVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLRIWERLYDGS
KGKVILETKSSMAAVEIGGGPWFGTWKGDTSNTPELLKRALQVPLDLESTLGLVPFFKPP
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagatacggagcttgattgtttccatgaaccctaatttctcttcctttgagctctct
cgccctgtcactcgctcactccgatcgactaaactagttccccgctccatttctagggtt
tcggcgtcgatctccactccggcctctgacactgacaagatctccgtgaaacctgtttac
gtcccgacgcctcccaatcgtgagctccggactcctcacagtggataccatttcgatgga
acagctaggaagttcttcgagggatggtatttcagggtttcaattccagacaagagggag
agtttttgctttatgtattctgtggagaatcctgcatttcgccagagattgtcaccattg
gaagtggctcttcatggacctagattcactggtgtcggagctcagattcttggcgctaat
gataaatatttatgccaatacacgcaagagtctcacaacttctggggagatcgacatgag
ctagttttggggaatacttttagtgctgtgccaggcgccaactctccaaacaaggaggtt
ccaccagaggaatttaacagaagagtgtcagaagggttccaagctaccccattttggcat
caaggtcacatttgcgatgatggccggactgactatgcggaaactgtgaagtctgctcgt
tgggagtatagtactcgtcctgtttacggttggggtgatgttggggccaaacagaagtct
actgcaggctggcctgcagcttttcctgtatttgagcctcattggcagatatgcatggca
ggaggcctttctacagggtggatagaatggggcggtgaaaggtttgagtttcgggatgca
ccttcttattcagagaagaattggggtggaggcttcccaagaaaatggttttgggtccag
tgtaatgtctttgaaggggcaagtggagaagttgctttaactgcaggtggcgggttgagg
cagttgcctggattgactgagacctatgaaaatgctgcactggtttgtgtacactatgat
ggaaaattgtccgagtttgttccgtggaatggtgttgttagatgggaaatgtctccctgg
ggttattggtatataactgcagagaacgaaacccatatggtggaactagaggcaagaaca
aatgaagcgggtacacctctgcgtgctcctaccacagaagttgggctagcaacggcttgc
agagatagttgttacggtgaattgaagttgcggatatgggaacggctatatgatggaagt
aaaggaaaggtgatactagagacaaagagctcaatggcagcggtggagataggaggagga
ccgtggtttgggacatggaaaggagatacgagcaacacccccgagctactcaaacgggct
cttcaggtcccattggatcttgaaagcaccttaggtttggtccctttcttcaagccaccg
ggtttgtaa
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