Arabidopsis lyrata (lyrate rockcress): 9306207
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Entry
9306207 CDS
T01578
Name
(RefSeq) (E)-beta-ocimene synthase, chloroplastic
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900
Terpenoid backbone biosynthesis
aly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9306207
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
9306207
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Paralog
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Nop53
Dis3l2_C_term
THOC7
Motif
Other DBs
NCBI-GeneID:
9306207
NCBI-ProteinID:
XP_020872154
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MTAHNLCFNSAFVCNVHHQNTQHFPCNAVSKTTSAHAVTVRRRSASYRPPLWDHQYLLSL
ENIYVKEAETAEKAKLLKEEVRKTLGEIEGTIEQLEMIDSLQRLGISYHYKHEIHEILKN
IHDQRGEIVREAQDLHATSLEFFLLRQHGFDVSQDAFDVFISETGVFRKTLCSDIKGLLS
LYEASYFSKGSEFKLKDTRIYAKKRLSEFVAESSKTICREDETYIFEMVKRALETPYHWS
IRRLEARWYINVYEHKHEMNPLLFEFAATDFNMLQANHQEELKLVSSWWNSTGLMKQLDF
VRDRITESYFWTIGIFYEPEFKYCRMILTKIFMLIAIMDDIYDIYGTLEELEIFTNVVEK
WDVNHVERLPNYMRICFLFLYNEINQIGYDVLRDKGLNVIPYLKQVWTDLFKTFLMEAKW
YKTEHRPSFEEYMQNGVISSSVPTILLHLFSVLPDHISDQTLTDVSKNHSVVRSCATILR
LANDLATSTDEMARGDSPKSVQCYMYETRASEEEARGHMQSMISDSWDVINSDFKTAHTS
SLPRGFVAAAANLNRVVQCIYQHGDGHGSPEKTKTVDYIQSLLFNPVPL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcacaatctctgcttcaattcagcttttgtttgcaacgttcatcatcaaaac
actcagcatttcccttgtaacgcagtctccaaaacgacctcggctcatgctgtcaccgtc
cgccgccgttctgccagttatcgtccacctctatgggatcatcaatatctcctctcactc
gagaatatatatgtgaaagaagctgaaaccgcggagaaagctaaattgttgaaagaagag
gtgaggaagacactaggtgaaattgaaggtactattgagcagctggaaatgatcgattct
ttgcaaagactcggaatctcatatcactataaacacgaaatccatgaaattttgaaaaac
attcatgaccaacgcggcgaaattgtgagggaagcacaagatcttcatgctacatcactt
gaattttttctcctaaggcaacatggttttgatgtctcgcaagatgcttttgacgttttc
ataagtgagaccggagtattcagaaaaactctatgcagcgatatcaaagggttactctct
ctatacgaagcttcttatttttcaaagggttcggagtttaaactcaaggacactagaatt
tatgcaaaaaagcgattaagtgagtttgtcgcggaaagtagcaaaactatttgcagagaa
gatgaaacttatatatttgagatggtgaaacgagcactagagacgccgtaccattggagc
atacgaaggttagaagcaagatggtacataaatgtgtacgaacacaagcatgaaatgaac
cctctcttgtttgagtttgcagcaactgatttcaacatgttacaagctaatcatcaagaa
gaacttaaactagtttctagttggtggaacagcacaggacttatgaaacaacttgatttc
gtgagagaccgaatcacagagagttatttttggaccattggaatattttacgagccagag
tttaaatactgccgaatgatactcaccaaaatattcatgttaattgcgattatggatgat
atctacgatatctatggtacattagaggagctcgagattttcacaaatgttgtcgaaaaa
tgggatgtgaaccatgttgaaagacttcccaactacatgagaatttgttttctttttcta
tacaatgagatcaaccaaataggatacgatgttctgagagacaaaggacttaacgttatc
ccttacctcaaacaagtttggacggatctatttaaaacgttcctgatggaagcaaagtgg
tacaaaactgaacacagaccaagtttcgaagaatatatgcaaaacggtgtgatctcgagt
tctgtcccaacgatactgctccaccttttctccgtcctacccgaccacatctccgaccaa
accctaaccgatgtttcaaaaaaccactctgtcgtccggagctgtgccaccattctccgt
ctcgctaatgatctcgccacctcaacggatgagatggcaagaggagattccccaaagtca
gtccagtgttacatgtatgagacaagagccagtgaggaagaggcacgtggacacatgcaa
agtatgatcagcgactcttgggacgtcataaactccgattttaaaacggcacacacttct
tctcttcctcgtggtttcgtggcagccgccgcaaatcttaaccgcgtggtacagtgtatc
taccagcacggtgatggccacggcagccccgaaaagaccaagaccgttgattatatccaa
tccctactcttcaatcccgttccgttatag
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