Arabidopsis lyrata (lyrate rockcress): 9306802
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Entry
9306802 CDS
T01578
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
9306802
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9306802
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9306802
Enzymes [BR:
aly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
9306802
Amino acid related enzymes [BR:
aly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
9306802
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
9306802
Prokaryotic type
Other AARSs
9306802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
9306802
NCBI-ProteinID:
XP_002868681
UniProt:
D7MJD5
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MEVVGEGKEFSFPREEEKVLSFWNQIDAFKTQLKRTEHLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEQLIEKKLGIERRAQVLQMGIDKYNEE
CRSVVTRYVEEWEKVITRSGRWIDFKNDYKTMDLPFMESVWWVFAQLFDKNLVYKGFKVM
PYSTGLKTQLSNSEAGLNYKDVSDPEIMVTFPVIGDQDNAAFVAWTTTPWTLPSNLALCV
NPNFVYLKVRNKHNGRVYVVAESRLSALPADTKKSNPKPKGGDSAADSYQVLEKFDGASL
VGKKYEPLFDYFSDFSCVAFRVVADDYVTDDSGTGIVHCAPAFGEDDYRVCLENKIVEQG
ENLVVAVDEDGLFTERITHFFGRYVKDADKDIIEAVKTKGRLVKTGSFTHSYPFCYRSDT
PLIYRALPCWFVRVEDQLKEQLLENNEQTYWVPDHVKDKRFHNWLENARDWCISRSRFWG
TPLPIWISDDGEEVVVMDSVEKLEKLSGVKVFDLHRHHIDQITIPSSRGPEFGVLRRVED
VFDCWFESGSMPYAYIHYPFENKELFESNFPGHFVAEGLDQTRGWFYTLMVLSTALFGKP
AFRNLICNGLVLAEDGKKMSKSLDNYPPPLEVIDEYGADAVRLYLINSPIVRAEPLRFRK
EGVLGVVKDVFLPWYNAYRFLVQNAKRLEIEVSGPFVPTDLATLRSSNVLDQWIYSATQS
LVCFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEDDCHIALSTLYNVL
LTSCKVMTPFTPFFTETLYQNLRKACEGSEESIHYCSFPEEAEGTRVERIEQSVTRMMTI
IDLARNIRERHKLPLKTPLKEITVVHPDAEFLDDITGKLKEYVLEELNVRSLVPCNDTLK
YASLKAEPDFSVLGKRLGKSMRLVAKEVKEMSQQDILRFEETRKVTIAGHTLELTDIKIV
RVFKRPDGLKDTEIDANGDGDVLVILNLQPDDSLYEAGVAREIVNRIQKLRKKSGLEPTD
VVEVYIESLDKDESALQQVLCSQEQYIKDTIGSSLLPSTLMPSHAVILSDESFQNVSKLS
FKISLARPALKFNEDAILALFSGDEKFARGLQAYLLSRDQSNLKSEFQQGNGKIITLSCI
EKLPVVSVVLGDHLHLTVGDYLLSTSNS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagtgggagaagggaaggagttctcttttcctcgggaggaagagaaagtcctc
tcattctggaatcaaatcgatgccttcaagacgcagctcaaacgaacagagcatctcccc
gaatacattttctacgacgggcctcctttcgccaccggtcttcctcactacggccacatc
ctcgccggcaccatcaaggacatcgtcactcgctaccagaccatgactggtcaccacgta
acgcgtcgcttcgggtgggactgtcacggcctcccggttgagcaactgattgaaaagaag
ctcggtattgagaggagagcacaagtgcttcagatggggattgataagtataacgaagag
tgtaggagtgttgtgactcggtatgtggaggagtgggagaaggtgattactagaagtggt
cgttggattgatttcaagaacgactataagacgatggatctgccttttatggaaagtgtt
tggtgggtttttgctcagctttttgataagaatcttgtctacaaaggcttcaaggttatg
ccttatagtactggtctcaagacacaattatctaattcagaagctggtttgaactacaag
gacgtttcagatcctgagattatggtgacgttcccagttattggcgatcaagataatgct
gcttttgtggcttggactactactccatggactcttcctagcaatcttgctttgtgtgtc
aatcccaattttgtttatctcaaggttcgtaacaagcacaatgggagagtctacgtggtt
gctgaatctcgcctctcagcccttcccgctgataccaagaaatcaaatcctaaacccaaa
ggtggtgatagtgcagctgattcttatcaagttttggagaaatttgatggagcttccctg
gttgggaagaagtatgaacctttgtttgactactttagtgatttctcatgtgtggccttt
cgagtagtagcagatgattatgtcactgatgacagtggtactggcatcgtccactgtgct
cctgcctttggtgaagacgattaccgtgtttgtcttgagaacaagatcgttgaacagggt
gaaaatctagttgtggctgttgatgaggatgggctttttactgagagaattacccatttc
tttggccggtatgtcaaagatgccgacaaggatataattgaagccgtgaagaccaaaggc
agacttgtcaaaactgggagctttactcactcatatccgttttgctatcgatcagacact
cctctcatatatagagcccttccctgttggtttgtccgggtggaggaccagttgaaggaa
cagttgttagaaaacaatgaacagacatactgggtacctgatcatgtgaaggataaacgc
tttcacaattggcttgaaaatgcaagggattggtgcattagccgaagtagattttggggc
acgcctctaccaatatggatcagtgatgatggtgaggaagttgttgtcatggattctgtc
gagaagcttgaaaagctctctggtgtcaaggtctttgatctacatcgtcaccatattgat
caaattacaatcccatctagtcgtgggcctgagtttggtgtgctccgtcgtgtagaagac
gtttttgattgttggtttgagagtgggtcaatgccttatgcgtacatccattatcctttt
gaaaacaaggagctttttgagagtaacttccctggtcattttgtggctgaagggcttgat
caaactcgtggatggttttatactcttatggtgctgtcgactgcattatttggaaagcca
gcatttcgaaatctgatttgcaatggtcttgtgcttgctgaggatggaaaaaagatgagt
aagagtttagataattatccgcctcctctggaagtcatagatgagtacggagctgatgct
gtgcgattgtacctcatcaattctccgatcgtacgcgccgagccactacgcttcagaaag
gaaggagtacttggtgttgtcaaagatgtatttcttccatggtacaatgcatacagattc
cttgttcagaatgcaaagagacttgagattgaggtttctggaccatttgttcctactgat
ctagctactttacggtcatcaaacgttctcgatcagtggatttactcagctacccagagt
cttgtttgttttgtccgtcaggagatggatggttaccggctttatactgttgttccgtat
cttttgaagttcctcgacaatctcactaacatatatgttagattcaaccgcaagaggtta
aaaggccgtacaggagaagatgattgtcacattgctctttcaactctatacaatgtgctc
ctcacttcttgcaaagtgatgaccccttttacaccttttttcactgagacgctataccag
aatctgcggaaagcatgtgaaggttcagaggaaagcattcattactgcagttttccggag
gaagctgaaggaacgagagtggagaggattgagcaaagtgttacaaggatgatgacaatc
atcgatcttgctcggaacattcgtgagcgtcacaagctacccttgaaaactcctctaaag
gaaatcactgtagttcatccagatgcagaattcttggatgacataactggaaaactaaaa
gagtatgtcttggaagaacttaatgtaagatctcttgtgccatgcaatgatactctcaag
tatgcgtctctaaaagcagaaccagatttcagtgtattgggaaaacgtcttggaaagtca
atgaggcttgttgcaaaagaagttaaagaaatgtctcagcaagatatcttaagatttgag
gagaccagaaaagttactattgctggacacacgctggagctaacagatatcaagattgtc
agggttttcaaacgcccggatggtttgaaagatacggagattgatgctaatggagatggt
gatgttttggtgattctgaatctacagccagatgattcgttgtatgaagcaggtgttgct
cgtgagattgtcaataggatccaaaaactacggaagaagtcaggtttggaaccaacagac
gttgtggaagtgtacattgaatcattggacaaggatgaatctgctttgcaacaagttctg
tgctctcaggaacaatacattaaggatacaattggttcatctttgcttccgtctacgttg
atgccatctcatgcagtgatactatctgacgagagtttccaaaacgtatcaaagctgtcg
tttaagattagcttggctcggccggctttgaagttcaacgaagatgctattcttgccttg
ttttcaggagatgagaaatttgcaagggggctccaagcgtacttgttatcacgggaccaa
tcgaatttaaaatcagaattccaacaaggaaatgggaagataataactctaagttgcatt
gagaagctgccagtggtgagtgtggtccttggagaccatcttcatttgacagtcggggac
tacttgttgagcacgtcaaactcatga
DBGET
integrated database retrieval system
