Arabidopsis lyrata (lyrate rockcress): 9309044
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Entry
9309044 CDS
T01578
Name
(RefSeq) transcription factor UNE10
KO
K16189
phytochrome-interacting factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
9309044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9309044
Transcription factors [BR:
aly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
9309044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
CDK2AP
bHLH_LHW
TPR_TRIP12_N
Motif
Other DBs
NCBI-GeneID:
9309044
NCBI-ProteinID:
XP_002875048
UniProt:
D7M5T4
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSQCVPNCHIDDTTAAAAATTTVRSITAADIPILDYEVAELTWENGQLGLHGLGPPRVTA
SSTKYSTGAGGTLESIVDQATRLPNHKPTDELVPWFHHRSSRAAMAMDALVPCSKLVQEQ
QSKPGGVGSTRVGSCSDGRTMAGGKRARVAPEWSGGGSQRLTMDTYDVGFTSTSMGSQDN
TIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKILQK
LVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQQLQMSLMSNP
MGLGIGMGMPGLGLLDLNSMNRAAAAATAPNIHANMMPNPFAPMTCPSWDASSNDARFQS
PLIPDPMAAFLACSTQPTTMEAYSRMAALYQQMQQQLPPSNPK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatgtgttccaaactgtcacatcgatgatactacggcagccgcagcagccacc
accaccgtccgctccatcacagcagcagacatccccatattagactacgaggtagccgag
ctgacgtgggagaacgggcaactgggcttgcacggcttaggtccaccgcgagtgacggct
tcgtcgacaaagtactccacaggcgcgggtggaacgttggagtcgatagtggaccaagct
actcgcctccctaaccataagcccaccgatgagctcgtcccgtggttccaccatcgctct
tctagggccgccatggccatggacgcgcttgtcccttgctccaaactagtacaggagcag
cagagcaagcccggtggcgttggctccacccgggtggggtcatgtagcgatggtcgtacc
atggccggtggaaaacgggccagagtggcgccggagtggagcgggggcgggagtcagagg
ctgaccatggacacttacgacgtaggtttcacctcaacatccatgggctcgcaagataac
accatcgacgatcatgactccgtctgccacagccgcccacagatggaggacgaagaagag
aagaaagccggaggcaaatcatcagtttcaaccaagagaagtagagctgctgctattcat
aaccaatccgaacgtaagaggagagataagatcaatcaaaggatgaagattttgcagaaa
ctggttcccaattccagcaagacggataaagcatctatgttggatgaagtgatagagtac
ttgaagcaacttcaagcacaagtgagcatgatgagcagaatgaacatgccttccatgatg
cttcctatggccatgcagcaacaacaacaacaactacaaatgtctctcatgtccaatccc
atgggtttagggattggcatggggatgcccgggctcggtctcctcgaccttaattctatg
aaccgagctgctgctgctgcaaccgctcctaatatccatgccaacatgatgccaaaccca
tttgcgcccatgacttgtccatcatgggatgcttcgtcaaacgacgctcgatttcagtct
cctctcattcccgatcctatggctgcctttcttgcatgctcgactcagccaacgacgatg
gaagcatatagcaggatggctgcattatatcagcaaatgcaacaacaacttcctccttcg
aatccaaaatga
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