Arabidopsis lyrata (lyrate rockcress): 9310998
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Entry
9310998 CDS
T01578
Name
(RefSeq) xanthine dehydrogenase 1 isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00230
Purine metabolism
aly00232
Caffeine metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01232
Nucleotide metabolism
aly04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
9310998
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
9310998
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9310998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9310998
Enzymes [BR:
aly01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
9310998
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
9310998
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of breast milk
9310998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
9310998
NCBI-ProteinID:
XP_002874931
UniProt:
D7M437
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MGSLKNEGEMEQTGDEFMEAILYVNGVRRVLPGGLAHMTLLEYLRDLGLTGTKLGCGEGG
CGACTVMVSSYDRKLNRCVHYAVNACLAPLYSVEGMHVISIEGVAHRKLGLHPLQESLAS
SHGSQCGFCTPGFIMSMYALLRSNKNSPCEEEIEECLAGNLCRCTGYRPIVDAFRVFAKT
NDALYSGLSSLSLQDGLSICPSTGRPCSCGSTKTNEAATCNDTRFQPISYSDIDGAKYTE
KELIFPPELLMRKLAPLKLRGKGGLIWYRPVRLQYLLDLKAKHPDAKLVVGNTEVGIEMR
LKKLQYRVLISVAQVPELNTVNVNDNGVEVGSALRLSELLRLFRKVVKERPAHETSVCKA
FIEQLKWFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRIINCNGDIRSIPAKDF
FRGYRKVDMESNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEERGQEL
CVSDVSIAFGGVAEVSLCARKTEEFLIGKNWNRGLLQDALKVIQSDVLIKEDSPGGMVEF
RKSLTLSFFFKFFLWVSHHIHDIKPTIETFPSSHMSAMQSFSQHCRIGRQDYETVKQGTS
IGLPEVHLSARIQVTGEAEYTDDTPVPPNTLHAALVLSQMPHARILSIDDSDTKYSPGFA
GLFLAKDVPADNMIGPVVADEELFATDVVTCVGQVIGVVVADTHENAKTAAGKVKVEYEE
LPAILSIKEAIDAKSFHPNTEKRLTKGDVELCFRSGQCDRIIEGEVQMGGQEHFYMEPHG
SLVWTIDGGNEVHMLSSTQDPHRHQNYVSRVLGLPMSKVVCKTKRIGGGFGGKETRSGFI
AAAASVPSYLLNRPVKLILDRDVDMMISGHRHSFVGKYKVGFTNEGKILAYDLEIYNNGG
NSLDLSSAILEIAMFHSDNVYEIPHVRITGSVCFTNFPSNTAFRGFGGPQGMLITENWIQ
RIAAELDRSPEEIKEMNFQVEGSMTHYSQYLQHCTLHQLWKELKVSCNFLKARSEVNEFN
SHNRWKKRGVAMIPTKFGVSFTKKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQ
VAASAFNIPLSSVFVSETSTDKVPNASPTAASVSSDMYGAAVLDACQQIKARMEPVASKL
NTNSFAELAGACYFQRIDLSAHGFHIVPDIGFDWISGKGNPFRYYTYGAAFAEVEIDTLT
GDFQTRTVDIILDLGYSLNPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIKPGNLLT
CGPGNYKIPTIHDIPFNFKVSLLKGNPNSKGIHSSKAVGEPPFFLASSVFFAIKDAIRAA
RAEMGLSNKWFPLDTPATPERIRMACFDEFTSPFVSKDFCPKLSV
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgctgaagaacgaaggagagatggagcaaacgggagatgagtttatggaggcg
atactgtacgttaatggtgttcgtagagtgttgcctggtggcttggctcatatgactctt
cttgaatatctcagagatttaggacttaccgggacaaagctggggtgcggcgaaggtggt
tgtggggcttgcacggtgatggtctcttcctatgacagaaaattaaacagatgcgtgcat
tatgctgtcaatgcttgtttagcacctctctattctgtagaaggaatgcatgtaatatcc
attgagggagttgctcatcgcaaacttggcttgcacccacttcaggagtcattggcatct
tctcatggttctcagtgtgggttttgtactcctgggtttatcatgtcgatgtatgcatta
ctgagatcaaataaaaactcaccttgtgaagaagagattgaagaatgtcttgcaggaaat
ttatgtcgttgtactggttacaggccgattgttgatgcctttcgagtttttgccaaaact
aatgatgctttatatagtggtttatcttcacttagccttcaagatggtttaagtatctgc
ccatctactggcaggccctgttcatgtggatcaacaaaaacaaatgaagcggccacttgt
aacgacactagatttcagcctatctcatatagtgatatagatggagctaagtatacagaa
aaggagcttatattcccccctgagcttttaatgaggaaattagctcctttaaagctgaga
ggaaagggagggcttatctggtacagacccgtaagacttcagtacttgcttgatctcaaa
gcaaaacatccggatgcaaaactagtggtaggtaatacagaggtgggaatcgaaatgaga
ctgaagaagttacagtatcgggtgctaatatctgtggctcaagtcccagaactcaacaca
gtgaatgtcaatgacaatggagtagaggttggttctgcactgagactttctgaactcctg
agactattcaggaaggttgtaaaggagcgtcctgcacatgaaacatcagtttgtaaggct
tttattgaacaattgaagtggtttgctgggacacaaataaggaatgttgcttgcattggt
ggaaacatctgtacagctagtccaatatctgatttaaatcctctttggatggcttcaaga
gcagaatttcggataatcaactgcaatggagatattaggtccatacctgcaaaagatttc
ttccgtggttatcgtaaagtggatatggaaagcaatgaaatcttgttgtcagtattccta
ccatggacaaggcctttggagtatgtgaaagaatttaaacaagcccaccgtagggatgat
gatatagctattgttaatggtggaatgcgtgtatttcttgaagagagaggtcaagaattg
tgtgtttctgacgtatcgattgcatttggtggtgtggctgaggtttctctgtgtgccaga
aagactgaggaatttctaatcggaaagaattggaatagaggtcttctgcaagatgctttg
aaggtcatacaaagcgatgtattaattaaggaagattctcctggtggaatggtggagttc
cggaaatctctaaccctaagcttcttctttaaatttttcttatgggtttctcatcatata
catgatataaagccaactatagagaccttcccatcctcccatatgtcagctatgcaatca
ttttctcagcattgtagaattggaagacaagactatgagaccgtaaaacagggaacatct
attggcttgccggaagtccatctttcggcgagaatacaggtcacaggggaggcagaatat
actgatgataccccagtgcctcctaataccttgcatgctgccttagtgctaagccaaatg
ccacatgcccgcatactttcaattgacgactctgataccaaatattcgcctggttttgct
ggtctatttcttgctaaagatgttcccgcagataatatgattggaccagttgttgctgat
gaggaactatttgccacggacgtggtcacgtgtgtaggacaagtcattggtgtggttgtt
gctgatacacatgaaaatgcaaaaaccgcggcaggaaaagttaaagtagagtatgaagaa
ttaccagcgatattatcaatcaaggaggctattgatgctaaaagtttccacccgaacaca
gaaaaaaggttaacaaaaggggatgtagagctatgctttcgatcaggtcagtgtgatagg
ataatagagggcgaggttcaaatgggtggtcaggaacacttttacatggaacctcatggt
agcttagtttggacaattgatggaggcaacgaagttcatatgctctcatccactcaagat
cctcataggcaccagaactatgtttctcgtgtgctcggtctgccaatgtctaaagtggta
tgcaaaaccaaacgaattggtggtggctttggtggtaaggaaacgagatcgggcttcata
gctgctgcagcttctgttccttcctacctgttgaatcgacctgtgaaactcatactggac
agagatgtggacatgatgatatctggtcatcgtcatagttttgttggaaagtacaaggta
ggatttacgaatgaaggaaaaatattggcgtatgaccttgaaatctacaacaatggtgga
aactctttggatctttcctctgctattctcgaaattgccatgtttcactcggataatgtt
tatgagatcccacatgtgaggatcacagggagcgtttgctttactaattttcctagcaac
actgctttccgagggtttggagggcctcaaggtatgcttataactgaaaactggattcag
agaatcgcagctgaacttgatcgaagccctgaagaaatcaaagagatgaactttcaagtg
gaaggttctatgacacattactctcagtatcttcagcattgcacactgcatcagctgtgg
aaggagctgaaagtatcctgcaactttctaaaggctcgtagcgaagtcaacgagtttaat
agtcataatcggtggaaaaagcgtggtgtggctatgattcccacaaaatttggcgtatca
tttaccaaaaagttcatgaaccaggctggtgctcttgttcatgtttacacagacggtact
gttttggtgacacatggaggcgtggaaatgggtcaaggattgcatacaaaggttgcccaa
gttgccgcatctgcctttaacattccccttagttcggtttttgtgtcagagacgagtacc
gacaaggttccaaatgcgtcaccaactgctgcttctgtgagctctgacatgtacggtgct
gcagttttggatgcttgtcagcagatcaaagcacgaatggagcctgttgcatctaagctc
aataccaactcttttgctgagctggcaggcgcgtgctattttcaacgcatagacctctct
gctcacggttttcatatcgttcccgatattggctttgactggatatctggaaaagggaac
ccatttaggtattatacatatggagctgcatttgctgaagttgagatcgatacattgact
ggtgattttcagacaagaacggttgatataatattggacctcggatattctcttaaccca
gccatcgatattggacaaatagaaggagcattcgtacaagggctaggttgggtagcttta
gaagaactcaaatggggagatgcagctcataaatggattaagccgggaaatctactcact
tgcggacctggaaactacaaaatacctaccattcacgacattccattcaacttcaaggtt
tctcttctcaaggggaatccaaattcaaaggggatacattcatcaaaagcagttggtgag
cctccgttttttctagcatcatcggtcttctttgcgattaaagatgcaatcagagcggct
agagccgagatgggtcttagcaacaaatggtttccactggacactcctgcgactccagag
cgtatcaggatggcttgtttcgacgagtttacttctccttttgtaagtaaagatttctgc
cccaagcttagtgtttga
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integrated database retrieval system
