Arabidopsis lyrata (lyrate rockcress): 9312728
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Entry
9312728 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PIF6
KO
K16189
phytochrome-interacting factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
9312728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9312728
Transcription factors [BR:
aly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
9312728
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
DUF6033
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
9312728
NCBI-ProteinID:
XP_020881998
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MELVFENGQILAKGQRSNVPLQNQRTKSIMDLYEAEYNEDFMKSIIHGGGGGANKNLGDT
QVVPQSHVVPPHETEMLESNRHVDDSTLIETLKASSSKRMMVDYDNRMKIKFIPPDEQSV
VAERMVESGFNTSSAGFTEDSEGSMYLSSSLDDESDDARPQVPARTRKALVKRKRNAEAN
NSPERKQRRDINKKMRTLQDLLPNSHKDDNESMLDEAIIYMKNLKLQVQMMTMGNRFVTP
SMMLPLGLHYSQMGLAMGMGMQMDAQQFLPAHVLGAGLPGINDSADMLRFLSHPGLMPMQ
NSAPFTPTEDCSPQSVPPSCAAFPNQIPNPTSLSNLDGASLHKKSRNINR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgtgtttgagaatggccagattcttgcaaagggccaaagatccaacgttcct
ctgcagaatcaacgtaccaaatcgatcatggatttgtatgaggccgagtataacgaggac
ttcatgaagagtatcatccatggtggtggtggtggtgccaacaagaatctcggagacacg
caggttgttccacaaagtcatgttgttcctcctcatgaaacagaaatgttggaaagcaat
agacatgttgacgattcaactttgattgagactttgaaagcttcttcatcaaagaggatg
atggttgattatgataaccgaatgaagatcaagtttatacctcctgatgagcaatctgtg
gttgctgaaaggatggttgaatcgggctttaacacttcctccgcaggttttactgaagac
agtgaaggatcgatgtatctgagcagcagtctagatgacgagtcagatgatgcgaggcca
caagttcctgcaagaacaagaaaagctttggtcaaaagaaaacgaaatgcagaagctaat
aattcacctgaaagaaagcaaagaagagacatcaacaagaaaatgcgtactttgcaggat
ctactacctaattcccacaaggatgacaacgaatcgatgttggatgaagcaatcatttat
atgaaaaacctaaaacttcaagttcagatgatgacgatgggtaacagatttgttacacca
tcaatgatgttgcctttggggctgcattactctcagatgggtctagcaatgggtatggga
atgcaaatggacgcacaacagtttctgcctgcacatgttctaggagctggcttgcctggg
attaatgattcagcagatatgctaaggtttcttagccatcctggactaatgccaatgcaa
aactctgcacctttcactccaacggaagattgttccccacaatctgtccctccatcgtgc
gctgctttccctaaccaaataccaaaccccacctctttgtcaaatttagatggtgcatcc
ttacacaagaaatcaaggaacattaacagatga
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