KEGG   Arabidopsis lyrata (lyrate rockcress): 9317244
Entry
9317244           CDS       T01578                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    9317244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9317244
Enzymes [BR:aly01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     9317244
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     9317244
 Prokaryotic type
     9317244
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 EndIII_4Fe-2S HHH_8
Other DBs
NCBI-GeneID: 9317244
NCBI-ProteinID: XP_002881177
UniProt: D7LDL3
LinkDB
Position
Unknown
AA seq 354 aa
MNRQIHGAVSSSSKPISSKTQRPLSDSNSANGASGSVTRVYTRKKRLKQEASEPLEINPG
KGVNTHKQLRGLPDIEDFAYKKTIGSPSSRRSTETSITVTSVKTAGNPPENWVKVLEGIR
QMRSSEDAPVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNSLLT
PEAVDKADESTIRELIYPVGFYTRKATYMKKIARICLVKYNGDIPSSLDDLLSLPGIGPK
MAHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEW
VAINPLLVGFGQTICTPLRPRCEACSVTKLCPAAFKETSSPSSKLKKSNRSKEP
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgaatcgccaaattcacggagctgtatcttcttcttctaaaccaatctcctcaaaaacc
caacgtcctctctccgattccaactcagccaatggagcttctgggtcggtgactcgagtg
tatacccgaaagaaaagactaaagcaggaagcttcggagcctctggagataaatcccggc
aaaggagtcaatacccacaaacagctacgtggtttacccgatatagaagattttgcttac
aaaaagactattggatctccttcatctaggaggtcaacggaaactagcatcactgtgact
tcagtcaaaacagcaggaaatccgcctgaaaactgggtaaaagtgctcgagggaattcgt
caaatgagatcttctgaagatgcaccagttgattctatgggatgtgataaggccggaagc
tttctacctcctacggaaagaagatttgctgtcttgctaggagcacttctttcaagtcag
acaaaagatcaagttaataacgcggcaatacatcgtcttcatcaaaacagccttcttaca
ccggaagccgttgacaaagctgatgaatcaactataagagaattgatctatccggttgga
ttttatacaaggaaggctacatatatgaagaaaatagctagaatttgtctagtgaaatac
aacggagacattcctagctctttggacgacctgctgtctcttccagggattggtcccaag
atggcccatctgattctgcatatagcatggaatgatgtccaaggtatatgtgtagataca
catgtgcatcgcatttgcaatcgacttggttgggtgtctcgtccaggaaccaaacagaaa
actacatctccagaggaaacaagagtagctttgcaacaatggcttccaaaggaagaatgg
gttgccattaacccgcttttggtggggtttggacaaacgatttgcacaccattaagacct
cgctgcgaagcttgcagtgtcactaagctttgtcctgctgcattcaaagagacatcaagc
ccatcttccaaattgaagaaatctaaccgaagcaaagaaccatga

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