Arabidopsis lyrata (lyrate rockcress): 9319886
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Entry
9319886 CDS
T01578
Name
(RefSeq) probable DNA helicase MCM9 isoform X1
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9319886
03400 DNA repair and recombination proteins [BR:
aly03400
]
9319886
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
9319886
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
9319886
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
9319886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
AAA_3
XPC-binding
Sigma54_activat
AAA_16
AAA_22
MCM_N
RuvB_N
FtsK_SpoIIIE
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
9319886
NCBI-ProteinID:
XP_002883819
UniProt:
D7L0Z3
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MVEMESPTQTAEHIESMTEFLAKHYSDQLREISLSSDPKLHYPLFIEYAELVDDNPSLAH
LVFSNPEQFLRQFNDSAILAHKIALEHMKKFEKKIGIEKRFIHVRINTSGSPLERSPETF
PSIGRVRVRHRGILLMLKGTVIRSGAVKMYEGERMYRCRKCKHMFPIFPELESINSIVKP
PFCPSQRSKSCEGTNFDPVDDTVTRHDYQEIKIQENTQVLGVGVIPRSILVVLKDDLVDN
VKAGDDVVVSGILTSKWSHDLKDVRCDLEPMLIANHVRRTNELKSEINISDDLIEKFKNF
WSHFRDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLI
GDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVTAVKDGEWMLEAGALVLADGGLCC
IDEFDSMREHDRATIHEAMEQQSISVAKAGLVTTLSTKTIVFGATNPKGQYDPDQSLSVN
TALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEVQIEQGRDVDDLTTIWPLPMLQRY
IQFVKRNFRPVLSKEAEEIISSYYRLQRRSSTHNAARTTVRMLESLIRLAQAHARLMFRN
EVTRLDAITAILCIESSMTISAIVDSMGNALHSNFSEEPDQEYAKQEKIILEKLRGDDIY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaatggaatcgccgacacagacggcggagcacattgaatccatgacggagttt
ctggcaaagcactattccgatcagctccgcgaaatctctctctcttccgatcccaaactc
cactaccctctcttcatcgagtacgcagaactcgttgacgataatccttctctagcgcat
cttgttttctcaaatcccgaacagtttcttcgtcaattcaacgattcagccattttagca
cacaaaattgcgttggagcatatgaagaaatttgagaagaagattgggattgagaagaga
tttatacatgttcgtataaacactagtggatctcctctagaacgaagccctgagactttc
ccgagtattggccgggttagagtaaggcaccgagggattctgttgatgttgaaaggtacg
gttattcgatcgggggctgttaaaatgtatgaaggagaaaggatgtatcgatgccgaaaa
tgcaagcacatgtttcctattttccctgagttggaatcaatcaactctattgtgaaaccg
cctttttgtccttctcagcggtcaaaatcttgtgaaggcacaaactttgatcctgttgat
gatacagtaacacgccacgattatcaagaaatcaaaatccaagaaaatactcaggtttta
ggtgttggtgttatcccaaggtccattctagtcgtcctgaaagatgaccttgttgacaat
gttaaagctggagatgatgttgttgtctctggaatcttgacttcaaaatggtctcatgac
ttgaaagatgttcgctgtgaccttgaacctatgttgattgccaatcatgtcagaagaact
aatgagctcaaatcagaaatcaatatatctgatgatttgatcgagaagttcaagaacttt
tggagccacttcagagatacccctttgaaagggagaaatgctatcttacgaggtatctgc
ccccaagtcttcggactcttcactgttaagcttgcagttgccttgacactcattggaggt
gtgcaacatgttgatgcttctggtacaaaagtacggggagaatctcacttgcttctcatt
ggcgatccaggcactggaaaatcgcagttcttgaagtttgctgcaaaactaagcaacaga
gctgtaatcacaacgggactaggaagcacaagtgctggattgactgtaactgcagtgaag
gatggagagtggatgttggaagctggggcccttgttcttgcagatggtggactttgctgt
attgatgaatttgatagcatgagggagcatgacagagcaaccatacatgaagcaatggag
caacaaagtataagtgttgccaaggctggccttgtaacaactcttagcacaaagacaatc
gtcttcggtgcaacaaatcctaaaggacaatatgatcccgatcaatctctttctgtcaat
actgcactttccggtccattattgagcaggtttgacattgtacttgttctcttagataca
aaaaatcccgaatgggatgcagttgtatcctctcacatccttgccgaggtgcaaatagag
caaggcagagatgtcgatgatctgacaactatttggccactaccgatgcttcaaagatac
attcagtttgtgaaaagaaacttcaggcctgtcctatcaaaggaagcagaagaaattatt
tcaagttattatcgactccaaagaagatcttcaactcataatgcagcaagaacaaccgtg
cggatgttggaaagcttgatacgtttggctcaagctcatgcaaggcttatgttcagaaat
gaggtcacgcgattggatgccataacagcaatcctatgcattgaatcatcgatgaccatt
tcagccattgtagacagtatggggaatgcgcttcactcaaatttctccgaagaaccagat
caggaatacgcaaagcaagagaagatcatccttgaaaagctaagaggagacgacatctat
tag
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integrated database retrieval system
