KEGG   Alteromonas mediterranea DE1: amad1_06490
Entry
amad1_06490       CDS       T02340                                 
Name
(GenBank) Endonuclease III/Nth
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
amaa  Alteromonas mediterranea DE1
Pathway
amaa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    amad1_06490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amaa03400]
    amad1_06490
Enzymes [BR:amaa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     amad1_06490
DNA repair and recombination proteins [BR:amaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     amad1_06490
 Prokaryotic type
     amad1_06490
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AFV84811
LinkDB
Position
complement(1431772..1432485)
AA seq 237 aa
MTDVVKPISKQEKVREIMRILDELYPEVPIFLDHKDPYTLLIAVLLSAQCTDERVNQITP
KLFARADNPYDMVMMTIEEIQDIIRPCGLSPMKSKGIWHLSDMIIKQHNGEVPASFEALE
AMPAVGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPKERW
NDLHLQIILYGREYCPARGFDLNKCIITREFGRKRFINEVLKEQEKKQKIALKKKRK
NT seq 714 nt   +upstreamnt  +downstreamnt
atgactgacgtagtgaagcccatttctaagcaagaaaaagtacgtgaaatcatgcgtatt
ctagatgaactctatccagaagttccaatttttctcgatcataaagatccttataccttg
cttattgccgtgcttttatccgctcaatgtaccgacgaacgcgtaaaccaaattacacca
aagctatttgctcgcgcagataatccttacgatatggtgatgatgactattgaagaaatt
caagacattattcgcccttgtggtttatcgccgatgaaatctaaaggcatctggcatctg
tctgatatgataatcaagcagcataatggtgaagttcccgccagttttgaagcgctagaa
gccatgcctgcggtgggccacaaaaccgctgcggtagttatgtctcaaggctttggcatc
ccagcatttcctgtagatacccatatccatcgcctaatgtatcgttgggggctgtcaaac
gggaaaagtgtagagcaaaccgagcgagacgcgaaacgcttgttcccaaaagaaagatgg
aacgacctccatctccaaataatcctgtacggaagagagtactgccctgctcgcggtttc
gatctaaataaatgtattattacgcgcgaattcggcagaaagcgttttataaacgaagtg
ctaaaagaacaagaaaaaaagcaaaaaatagcgcttaagaaaaagcgaaaataa

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