Alteromonas mediterranea UM4b: I636_06835
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Entry
I636_06835 CDS
T02723
Name
(GenBank) RND family efflux transporter
KO
K18138
multidrug efflux pump
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad01501
beta-Lactam resistance
amad01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I636_06835
01503 Cationic antimicrobial peptide (CAMP) resistance
I636_06835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amad02000
]
I636_06835
01504 Antimicrobial resistance genes [BR:
amad01504
]
I636_06835
Transporters [BR:
amad02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I636_06835
Antimicrobial resistance genes [BR:
amad01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I636_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
HMA
DUF8028
Motif
Other DBs
NCBI-ProteinID:
AGQ01223
LinkDB
All DBs
Position
complement(1507406..1510522)
Genome browser
AA seq
1038 aa
AA seq
DB search
MSDSNLSSSVSDLPSLSIRRPVLIVVLNLLIAIAGLTALSGLEVRELPDVDTPRVTVTAQ
FPGASPETVDAEVTGRLEGAVARVSGVKNIYAQSEENSARVRVEFRPGVNLEDAANEVRE
SVSRVQRQLPEDVEQVAIIRADSDAQAVVSLAISSDTLDMETLTERVDTDVAPLFLSIPG
VADVTLNGDRERVLRVSVDPLRLTSFGLSMSDIGDALALAPFDVPAGSIQSAEQALIVRA
DATSVSAEDVGNIVVTGDIRINDVASVYFGPADTTSVVRLDGTPVIGVGVIRQASSNTIE
ISDEVLAMVEDLDKRFADMNIVVTADDAEFIRDSVKEVVVSLSLTIALVVVTLLVFIGSW
RATIVPALSIPVSLAGALAIIWGMGFSINILTLLALVLATGMIVDDAIVVSENIQRRRSM
GLGARAAAVVGTREVFFAVVATTAVLASVFIPIAFLPSTAGRLFREFGGVLAGAVVISSF
VALSLVPALTARLKVKQTSKTGLFSKTFGRFGHACLRVYQASLLKALKYGWVVGILSLAA
GGGAYILAQNIDNELLPSEDRGTIRIFARGPDGAGLNFMDRQAEKMEELLLPYVENGTID
SIYTVVGSWDPNIVFITAPLKHWDERDTSLQDVVNEIRPKLQQIPGAPGNAFGGNSLNLR
GQGGGLEIALTGDTYENIFKAAQRFSRQLEDTLSELGRPRISYDPTQPQMRVNIDRRRAE
ELGVPLTDIASTLRAAVNGDDIADLNVGDQAIPIMLQTNNRSTLDPSELTSLYVKSTDGN
LVPLSSVAYITEEGVAAELERQAQRRAIKVEMELPEDVALSEVVQQIRTLALDTLPDGIG
LVFLGEAQTFEETSKQVALTYVLAFIIVLLVLAAQFESVNSAVVVMLTVPFGIAAAVYAL
FLTGTSINIYSQIGLVMLIGLLAKNAILLIEFADQLRDKGFDIYDAIVEAGKVRLRPIMM
TLVSTILGGLPLILSTGAGAEARNAIGWVVFGGLGIAVVFTLYLTPVLYLALARFTKPRA
DESAKLEKEMEDAQAQHS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgattcaaacctatcttcttcggtaagcgatttaccctctctgtcgatacgacgt
ccggttcttatcgttgtacttaacttgcttattgctattgccgggcttaccgcacttagt
ggcctagaagttcgtgaacttcctgatgtagacaccccgcgagtaacggtaactgcgcaa
tttcctggcgcgtcaccggaaaccgtcgacgccgaggtaaccggacgccttgaaggtgcc
gttgcgcgagtaagcggtgttaagaacatatacgcacaaagtgaagaaaactctgcccga
gtaagggttgaatttcgaccaggcgtgaatttagaagatgcggcgaacgaggttcgcgaa
tcggttagccgtgttcaacgccagcttcccgaagacgttgaacaagtagcgattattcgc
gctgacagtgacgcacaagcggtggtaagtttggccatatctagcgatacgttagatatg
gagaccctaaccgaacgtgttgataccgatgtcgcgcctttgtttttaagtattccaggt
gttgccgacgtaacgctaaatggcgatcgagagcgcgttttacgtgtatctgttgaccct
cttcgtttaaccagttttggtttgtcgatgagtgatattggcgatgctctcgcccttgcg
ccatttgatgttcctgcaggtagtattcaatcggccgagcaagccttaattgtgcgggcc
gatgccacctccgtatctgctgaagatgtaggtaatattgttgtcaccggtgatattcgt
attaacgatgtggccagtgtttacttcggcccagcggacaccaccagcgtagtccgtttg
gacggtacgcctgttattggtgtaggcgtaatacgccaggccagttcaaatactattgaa
atatcagatgaagtgttggcaatggtcgaagaccttgataaacgctttgcggatatgaat
attgtggttaccgctgacgatgctgaattcattcgagattcagttaaagaagtggtcgta
tcccttagcctgaccatagcccttgttgtggttacccttcttgtatttattggctcgtgg
cgcgccaccattgttccagcgctttctatacccgtatcgcttgccggtgcacttgctatt
atttggggaatgggtttttccataaatatactcactttgctcgctttggtgcttgccacc
ggaatgatagttgacgacgccattgtcgtttctgaaaacattcagcgccgcagaagcatg
ggactaggtgcgcgcgctgcagccgtagtaggcactcgagaagttttctttgctgtggtt
gccaccacagccgtacttgcctctgtatttattcctatcgcgtttttgccttcgaccgca
gggcgtttgtttagagaatttggtggcgtactagcgggtgcagtggttatctcctctttt
gtagcgttgtctcttgtacctgcattaacggcacgtttgaaggtaaaacaaaccagtaaa
accggcctatttagcaaaacgttcggccgatttggccacgcgtgtttaagggtttaccaa
gcgtcgctactcaaagcgcttaaatatggctgggttgtgggcatattgagcttagccgcg
ggcggcggtgcctacattctggcgcaaaacatcgataatgagctattgccaagcgaagac
aggggcaccatacgcatatttgcccgtgggcctgacggcgcaggacttaactttatggac
agacaagcagagaaaatggaagagctgctgctgccttatgtagaaaacggcaccatcgac
tcgatttatacggtggttggatcatgggatcctaatatcgtctttatcactgcaccgctc
aaacattgggatgaacgagacacgtcgctgcaagacgtcgttaacgagattcgccctaaa
ctacagcaaattcctggtgcgccgggcaacgcatttggcggtaatagccttaaccttcgc
gggcaaggtggaggtcttgaaatcgcccttaccggtgacacgtacgagaatatatttaag
gctgcacagcgcttttcccggcaattagaagacaccctatctgagcttggcaggcctcgt
attagttacgaccctacccagcctcaaatgcgggtaaacatcgacagacgccgcgccgaa
gaactcggcgtcccgcttaccgatattgccagcacactccgggctgcggtcaacggcgat
gacattgccgacttgaacgtaggcgatcaagccattcctattatgctgcaaaccaataat
cgcagcacgcttgacccatcagaactaacgagcctttatgtgaaaagtactgacggtaat
ttggtaccgctttctagtgtggcttatataactgaagaaggggtagcagcagagcttgag
cgtcaagcgcagcgccgcgcaataaaagtagaaatggaattaccagaggacgtggcactt
agtgaagtggtgcaacaaattcgcacgcttgccctcgatacactacctgatggtattggc
cttgtatttttaggcgaagcgcaaacttttgaagaaacatccaaacaagtcgcgctaact
tacgtcctggcttttattattgtgttattagtactcgcagcgcagtttgaaagcgttaac
agcgctgttgtggtcatgctcaccgtacctttcggtattgctgccgcggtctacgcatta
tttttaacgggtacgagtattaatatttattctcagattgggttggtgatgttaattggt
cttttggccaaaaacgccattcttctaatagaatttgctgaccaattgcgcgataagggc
tttgatatttatgacgccattgttgaagcgggtaaagtgcgacttcgccccattatgatg
acacttgtttcgactatactcggtggcctgccgcttatattgtcaacgggagcaggcgct
gaagcccgtaatgctataggttgggtggtctttggcggcttggggattgccgttgtgttt
accctttatctcacgccggtactttatttagcgttagcgcgattcacaaaacccagagct
gatgaaagcgctaagctagaaaaagaaatggaagatgctcaagcacagcattcctaa
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