Akkermansia massiliensis: J5W79_07525
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Entry
J5W79_07525 CDS
T09439
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
amak
Akkermansia massiliensis
Pathway
amak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5W79_07525 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_07525 (nth)
Enzymes [BR:
amak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J5W79_07525 (nth)
DNA repair and recombination proteins [BR:
amak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5W79_07525 (nth)
Prokaryotic type
J5W79_07525 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QWP72216
LinkDB
All DBs
Position
1801140..1801778
Genome browser
AA seq
212 aa
AA seq
DB search
MDTKKRASIVQEELMSLYGNPPIPLAHRDAYTLLVAVLLSAQCTDKRVNLVTPALFALAS
TPEEMARQDVEAVREIVRPCGLSERKASAIVNLSRILVEKYQGQVPCDFAALESLPGVGH
KTASVVMTQAFGVPAFPVDTHIFRLSRLWGLSKGKTVEAVERDLKSLFPENSWGDLHLRI
VLYGREYCSARGCGGRCPICSRLAREDGSAGV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaaaaaacgggcttccattgtccaggaggaactcatgtccctgtatgggaac
cctcccattcccctggcgcaccgcgacgcctacaccctgctggtggcggttcttctgtcc
gcccagtgcacggacaagcgtgtaaacctggtgaccccggccctgttcgccctggcttcc
actccggaggaaatggcccggcaggatgtggaagcggtccgggaaatcgtgcggccctgc
ggcctctcggaaaggaaggcgtccgccatcgtgaacctcagccgcatcctggtggaaaaa
taccaggggcaggttccctgcgactttgcggccctggaatcccttcctggggtggggcat
aaaacggcctccgtcgtcatgacccaggccttcggcgttcctgcctttccggtggatacg
cacattttccgcctttcccggctgtgggggctgagcaaggggaaaacggtggaagccgtg
gaacgtgacttgaaaagccttttccctgaaaattcatggggggatcttcatttgcgcatc
gtcttgtacgggcgtgaatactgctctgcgcggggttgcggagggcgctgtccgatctgc
agccggctggcccgggaagacggttccgcgggtgtctga
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