KEGG   Alteromonas mediterranea U4: I607_05775
Entry
I607_05775        CDS       T02720                                 
Name
(GenBank) endonuclease III/Nth
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
amal  Alteromonas mediterranea U4
Pathway
amal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I607_05775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amal03400]
    I607_05775
Enzymes [BR:amal01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     I607_05775
DNA repair and recombination proteins [BR:amal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     I607_05775
 Prokaryotic type
     I607_05775
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AGP84959
LinkDB
Position
complement(1279401..1280114)
AA seq 237 aa
MTDVVKPISKQEKVREIMRILDELYPEVPIFLDHKDPYTLLIAVLLSAQCTDERVNQITP
KLFARADNPYDMVMMTIEEIQDIIRPCGLSPMKSKGIWHLSDMIIKQHNGEVPASFEALE
AMPAVGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPKERW
NDLHLQIILYGREYCPARGFDLNKCIITREFGRKRFINEVLKEQEKKQKIALKKKRK
NT seq 714 nt   +upstreamnt  +downstreamnt
atgactgacgtagtgaagcccatttctaagcaagaaaaagtacgtgaaatcatgcgtatt
ctggatgaactctatccagaagttccaatttttctcgatcataaagatccttataccctg
cttattgccgtgcttttatccgctcaatgtaccgatgaacgcgtaaaccaaattacacca
aagctatttgctcgcgcagataatccttacgatatggtgatgatgactattgaagaaatt
caagacattattcgcccttgtggtttatcgccgatgaaatctaaaggcatctggcatctg
tctgatatgataatcaagcagcataatggtgaagttcccgccagttttgaagcgctagaa
gccatgcctgcggtgggccacaaaaccgctgcggtagttatgtctcaaggctttggcatc
ccagcatttcctgtagatacccatatccatcgcctaatgtatcgttgggggctgtcaaac
ggaaaaagtgtagagcaaaccgagcgagacgcgaaacgcttgttcccaaaagaaagatgg
aacgacctccatctccaaataatcctgtatggaagagagtactgccctgctcgcggtttc
gatctaaataaatgtattattacgcgcgaattcggcagaaagcgttttataaacgaagtg
ctaaaagaacaagaaaaaaagcaaaaaatagcgcttaagaaaaagcgaaaataa

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