Actinomyces massiliensis: QU670_09805
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Entry
QU670_09805 CDS
T09278
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
amas
Actinomyces massiliensis
Pathway
amas03030
DNA replication
amas03410
Base excision repair
amas03420
Nucleotide excision repair
amas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QU670_09805 (ligA)
03410 Base excision repair
QU670_09805 (ligA)
03420 Nucleotide excision repair
QU670_09805 (ligA)
03430 Mismatch repair
QU670_09805 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amas03032
]
QU670_09805 (ligA)
03400 DNA repair and recombination proteins [BR:
amas03400
]
QU670_09805 (ligA)
Enzymes [BR:
amas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QU670_09805 (ligA)
DNA replication proteins [BR:
amas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QU670_09805 (ligA)
DNA repair and recombination proteins [BR:
amas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QU670_09805 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QU670_09805 (ligA)
MMR (mismatch excision repair)
DNA ligase
QU670_09805 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QU670_09805 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
PTCB-BRCT
HHH_8
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
WLD70768
LinkDB
All DBs
Position
complement(2294566..2297013)
Genome browser
AA seq
815 aa
AA seq
DB search
MTDDPAGQMRDDAPALNSVPAVARTRWTELVREIERARDAYYVAVDAQSPWSDAEYDAMY
RELEALEAAHPALVLPDSPTRTVGGRAATDFAEVQHHEHLYSLQDVFSLEEVEKWVERIV
ATTELPDSELPMTAEVKIDGLAVALTYEHGVLTRAATRGDGIVGEDVTGNVRTIDSVPLI
LAGESHPTLLEVRGEVYFPVEEFNAFNEKRRTENLERQAQGLPLLQVFANPRNAAAGSLR
QKNPAVTASRPLAMIAHGIGAFISGPGEEPPVEQHEWYDLLSRWGLPVSRYNRVVRGRAE
REAYIAHYSDHRHDLIHEIDGIVFKLDSRSLQADLGYTSRVPRWATAYKYPPEEVRTRLL
DIDVQVGRTGRVTPFGIMEPVLVAGSTVSRATLHNATEVVRKGVRIGDLVVLRKAGDVIP
EIVGPVTEARDGTERAFVMPEHCPSCGTSLAPAKEGDVDLRCPNTRSCPAQLTERVVHIG
SRGALDVEGLGDEAAAALTQPDAGREEALAALAAGHFLETERGRLRIPDAEIEALPPSER
IDAARRLLESAGVQEQSPVLTGEGGLFDVVVDDLREVMVYRRIARRGKPTEDWRLSRFFW
SKQSYNQDGSVKKPTAAGKNATTMLAQLAAARSRPLWRVLVALSVRHVGPTAARALADCF
GSLEALREASTEDLSQVDGVGPTIAASWEQWLAVDWHRQLLERWAAAGVRTADGSAQADS
GQAHTLSGLTIVVTGTLERFTRDGAKEAIVSRGGKAAGSVSKRTSFVVVGENAGSKEAKA
RELGLTVLDENAFERLLADGPDAVTPGATPGQPAE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgatcccgccggacagatgcgcgacgatgcccccgctctgaactccgttccc
gccgttgcccgcacccgttggactgagcttgtgcgcgagatcgagcgcgcccgagacgcc
tactacgtcgccgtagacgcccagagtccttggtcagatgccgaatacgacgcgatgtac
cgcgaactggaggcccttgaggccgcgcacccggcactggtcctgcccgattccccgaca
cggacggtgggcggacgcgccgccaccgacttcgccgaggtccagcaccacgagcacctt
tactccctgcaggatgtcttcagcctcgaagaggtcgagaaatgggtcgagcgcatcgtg
gcgacgactgagctgcccgattctgagctgcccatgaccgccgaggtcaagatcgacggc
ctggcagtggcactgacctatgagcacggcgtgctgacccgtgctgcaacgcgcggtgac
ggaatcgtgggcgaggacgtcaccggtaacgtgcgcaccatcgattcggtgccgctgatc
ctggcgggggagtctcaccccacgctgctggaggtccgcggcgaggtctacttcccggta
gaggaattcaacgctttcaacgagaagcgccgcacggagaatcttgagcggcaggctcag
ggactcccgttgctgcaagtcttcgccaatccccgcaatgctgcggccggctcgcttcgg
cagaagaatcctgcggtgacggcctcgcgccctctggccatgatcgctcacggtatcggt
gccttcatctccggcccgggggaggagccgccggtcgagcagcatgagtggtacgacctg
ctgtcccgttgggggctgcctgtatcccgctacaacagggtcgtgcgcgggcgcgccgag
cgggaggcatacatcgcgcattactcggaccatcgccatgatctcatccatgagatcgac
gggatcgtcttcaagctcgattcgcgctctctccaggccgatctcggatacacgtcccgc
gttccccggtgggcgaccgcatacaagtacccgcccgaggaggtgcgcacgcgcctgctc
gacatcgacgtccaggtcgggcgtaccgggcgcgtcacccctttcggaatcatggagccg
gtgctcgttgccgggtccaccgtctcgcgcgccacgcttcataacgccaccgaggtggtg
cgcaagggagtgcgcatcggcgacctcgtcgtgctgcgcaaggccggcgatgtcattccc
gagatcgtcgggcccgtcactgaggcgcgtgacggcactgagagggctttcgtcatgccc
gagcactgcccttcatgtggcacttcgctcgctccggccaaggagggcgatgtcgacctg
cgctgccccaatacgcgctcctgcccggcccagttgaccgagcgggtggttcacatcggt
tcacgcggggcgcttgacgtcgagggtttgggcgatgaggccgctgccgctctgacccag
cccgatgcagggcgcgaggaggccctggcggctctagccgccgggcatttcttggagact
gagagaggcagactgcgcattcccgatgctgagatagaggcgctgccgccctcggagcgg
atcgatgcggcgcgtcgactcctggagagcgcgggtgtgcaggagcagtccccagtgctc
accggagagggaggcctgttcgacgtggtggttgacgatctgcgcgaggtgatggtctac
cgccggatcgccaggcgggggaagcccacggaagactggcgtctgtctcgtttcttctgg
tccaagcagagctacaaccaggatgggagtgtgaagaagccgaccgctgccggcaagaac
gccaccacgatgctcgctcaactggccgcagcgaggtcacggccgttgtggcgtgtcctg
gtggcgttgtcggtacggcacgtggggccgacggcggcgcgagccctcgccgattgcttc
ggctcgctggaggcgcttcgcgaggccagcacggaggacctgtcccaggttgacggggtc
gggccgaccatcgccgcttcctgggagcagtggctcgccgtggattggcatcgacagctt
ctggaacgttgggccgcagcaggcgtgcgcaccgctgatggatccgcccaggcggattct
ggacaggcgcatacgctgtcgggactgaccattgtcgtgaccggcactttggaacgcttc
acccgcgatggcgccaaggaggcgatcgtctcgcgtggtggcaaggccgccgggagcgtg
tcgaagcgtacgagcttcgtggtcgtcggcgagaacgcggggtcgaaggaggcgaaggct
cgagagctgggcttgactgtcctcgacgagaatgccttcgagcggctcctggcagacgga
cccgacgctgtgactcctggagcaactcctggacagcccgccgaatga
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