Amycolatopsis mediterranei U32: AMED_4640
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Entry
AMED_4640 CDS
T01269
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00020
Citrate cycle (TCA cycle)
amd00270
Cysteine and methionine metabolism
amd00620
Pyruvate metabolism
amd00630
Glyoxylate and dicarboxylate metabolism
amd00680
Methane metabolism
amd00710
Carbon fixation by Calvin cycle
amd00720
Other carbon fixation pathways
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01200
Carbon metabolism
Module
amd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMED_4640 (mdh)
00620 Pyruvate metabolism
AMED_4640 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
AMED_4640 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AMED_4640 (mdh)
00720 Other carbon fixation pathways
AMED_4640 (mdh)
00680 Methane metabolism
AMED_4640 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AMED_4640 (mdh)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
AMED_4640 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Stealth_CR1
Motif
Other DBs
NCBI-ProteinID:
ADJ46409
UniProt:
A0A0H3DA44
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All DBs
Position
complement(5114273..5115259)
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AA seq
328 aa
AA seq
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MTQAPVNVTVTGAAGQIGYALLFRIASGQLLGQDVPVKLRLLEIPQAVKAAEGTAMELED
GAFPLLAGTDIFDDPKQAFEGTNIALLVGARPRSKGMERGDLLEANGGIFKPQGEAINAG
AADDIKVLVVGNPANTNALIARSHAPDVPAERFTAMTRLDHNRALAQLAKKLGVPVTELR
KVAIWGNHSATQYPSVQHAEFGGKSIADAVDQAWLENDFIPTVAKRGAAIIEARGLSSAA
SAASAAVDHVYTWVNGTPAGDWTSAAVASDGSYGVPEGLISSFPVTAENGRYKIVQGLEI
DDFSRARIDASVAELVEERDTVQKLGLI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagccccagtcaacgtgaccgtcaccggcgccgccggccagatcggctacgcg
ctgctcttccgcatcgcgtccggtcagctcctcggccaggacgtcccggtgaagctgcgg
ctcctcgagatcccgcaggcggtcaaggcggccgagggcaccgcgatggaactcgaagac
ggcgcgttcccgctgctggccggcaccgacatcttcgacgaccccaagcaggccttcgaa
ggcaccaacatcgccctcctcgtcggcgcccgcccccgcagcaagggcatggagcgcggc
gacctcctcgaggccaacggcggcatcttcaagccacagggcgaagccatcaacgccggc
gccgccgacgacatcaaggtcctcgtcgtcggcaaccccgccaacaccaacgccctcatc
gcccgctcgcacgcccccgacgtgcccgccgagcgcttcaccgcgatgacccgcctcgac
cacaaccgcgccctcgcccagctcgccaagaagctcggcgtcccggtgaccgaactgcgc
aaggtcgccatctggggcaaccactccgccacccagtacccctcggtccagcatgccgaa
ttcggcggcaagagcatcgccgacgccgtcgaccaggcctggctcgagaacgacttcatc
cccaccgtcgccaagcgcggcgcggccatcatcgaagcccgcggcctctcctccgccgcc
tcggccgcctccgccgccgtcgaccacgtctacacctgggtcaacggcacccccgccggc
gactggacctccgccgccgtggcctccgacggctcctacggcgtccccgaaggcctcatc
tcgtccttcccggtcaccgccgagaacggccggtacaagatcgtccagggcctcgagatc
gacgacttctcgcgcgcccgcatcgacgcctccgtcgcggagctcgtcgaggaacgcgac
accgtgcagaagctcggcctcatctga
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