Amycolatopsis mediterranei U32: AMED_5435
Help
Entry
AMED_5435 CDS
T01269
Symbol
fabF
Name
(GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase II
KO
K05551
minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.-
2.3.1.260
2.3.1.235
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00253
Tetracycline biosynthesis
amd01056
Biosynthesis of type II polyketide backbone
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01056 Biosynthesis of type II polyketide backbone
AMED_5435 (fabF)
00253 Tetracycline biosynthesis
AMED_5435 (fabF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amd01004
]
AMED_5435 (fabF)
01008 Polyketide biosynthesis proteins [BR:
amd01008
]
AMED_5435 (fabF)
Enzymes [BR:
amd01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.235 tetracenomycin F2 synthase
AMED_5435 (fabF)
2.3.1.260 tetracycline polyketide synthase
AMED_5435 (fabF)
Lipid biosynthesis proteins [BR:
amd01004
]
Polyketide synthase
Component type
AMED_5435 (fabF)
Polyketide biosynthesis proteins [BR:
amd01008
]
Polyketide synthase (PKS)
Type II PKS
C7-C14 cyclized polyketide type
Octaketide PKS
AMED_5435 (fabF)
Nonaketide PKS
AMED_5435 (fabF)
Decaketide PKS
AMED_5435 (fabF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
ADJ47195
UniProt:
A0A0H3D866
LinkDB
All DBs
Position
complement(6027773..6029032)
Genome browser
AA seq
419 aa
AA seq
DB search
MTRTAVITGIGVVAPGGIGTKAFWALLTEGRTATRPISAFDASRFRSRIAAECDFEGELN
GLTAEESGRLDRAAQFALVCADEAVVDGGLDPGALDPYRLGVTIGSAVGATIGLENEYLT
VSAGARDWVVDPAKAAPQLYEYLVPSSFAAEVAWRCGAQGPVATISTGCTSGLDAIGHAA
GLIESGEADVMLAGATDAPISPITVACFDAIKATSPDNDDAARASRPFDRTRNGFVLGEG
AAVFVVEEAESARRRGAHVYCAVSGFATRANAYHMTGLKPDGRELAEAIDVALRRASLPG
DRVGYVNAHGSGTKQNDRHETAAVKRSLGAHAYRVPVSSIKSMIGHSLGAIGSLEVAACA
LALEHQVVPPTANLHERDPECDLDYVPNVARETGLDTVLTVGSGFGGFQTAVVLTREPV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaggaccgcggtcatcaccggcatcggcgtcgtcgccccgggcggcatcggcacc
aaggccttctgggcgttgctcaccgaaggccgcaccgcgacccggccgatctcggccttc
gacgcctcccggttccgctcgcgcatcgcggccgagtgcgacttcgagggcgagctcaac
ggcctgaccgccgaggagtccgggcgcctcgaccgcgcggcgcagttcgcgctcgtctgc
gcggacgaagccgtggtcgacggcggcctggacccgggtgcgctcgacccgtaccggctc
ggcgtcacgatcggcagcgccgtcggcgccaccatcgggctggagaacgagtacctcacc
gtctccgcgggggcccgcgactgggtggtcgaccccgccaaggccgccccgcagctgtac
gagtacctcgtcccgagcagtttcgcggccgaagtcgcctggcgctgcggcgcacagggc
ccggtcgccacgatctccaccggctgcacctccgggctcgacgcgatcggccacgcggcc
gggctcatcgagtccggcgaggccgacgtcatgctcgccggcgccaccgacgcgccgatc
tcgccgatcaccgtcgcctgcttcgacgcgatcaaggccacgtcccccgacaacgacgac
gccgcgcgcgcgtcccgtccgttcgaccgcacgcgcaacggtttcgtgctcggcgaaggg
gccgccgtcttcgtcgtcgaggaagccgagagcgcccggcgacgcggcgcgcacgtctac
tgcgcggtctccggcttcgcgaccagggcgaacgcctaccacatgacggggctgaaaccc
gacggccgcgagctggccgaggccatcgacgtcgctctccgccgggccagcctgcccggc
gaccgcgtcggctacgtcaacgcccacggttcgggcaccaagcagaacgaccggcacgag
accgccgcggtcaaacgcagcctcggcgcgcacgcctaccgcgtgccggtcagctcgatc
aagtcgatgatcgggcactcgctcggcgcgatcggctcgctggaggtcgcggcctgcgcg
ctggcgctggagcaccaggtcgtgccgccgacggcgaacctgcacgagcgcgacccggaa
tgcgatctcgactacgtgccgaacgtcgcccgggaaaccgggctggacaccgtgctcacc
gtcggcagcggcttcggcgggttccagacggccgttgtcctgacccgggagccggtatga
DBGET
integrated database retrieval system
