Anopheles merus: 121589858
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Entry
121589858 CDS
T08889
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
amer
Anopheles merus
Pathway
amer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121589858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amer03400
]
121589858
Enzymes [BR:
amer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121589858
DNA repair and recombination proteins [BR:
amer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121589858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
DNA_ligase_IV
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
121589858
NCBI-ProteinID:
XP_041765000
LinkDB
All DBs
Position
X:complement(11026347..11047443)
Genome browser
AA seq
882 aa
AA seq
DB search
MDRTMESFGVLSTLLEKVHHAQRPGKEAALRKFFQDFERYRQSCEEGPNRPSIHAWLRLL
LPGLDRERKAYGLRERSLAEAYVRRARARSAQRGCAAAALGCHDDLATRLGSLLHGPLPG
GGRSDRGGRERSNLRLAVSSRRILQLYHPSAPTIYDGASDLKQMVEQIESRQAAANELDE
PDGVIRPLHFVRPMLASWLELRQVGELLRRDAYWLETKMDGERFQVHWDGETFRYYSRNG
HDYSESFGRSADQVXGTLTPMLATLLAPSVXVARAGGEMMVFDRRTLRYRDKCDGTDVKA
LRPGNTQLRPCFCAYDVLHHNGRSLAGVPYAERARLLAESVREQFGFLERCRRGRVRDPP
HLLELINGAIDERQEGVVLKREDAPYRPNRRAGTGWYKIKPDYVDGLVVDFDLLVLGGFY
NQRRTYVNAFLVGWRPAPPPAPIYLSVAKVVDGPGDARVQQLTKTLRPHWRXGPADGGDG
GTVVQCGQTTPDVWIXPTDSITLQLRGSELVLWERSDSYAAGYTIRFPRIVTVRPDKLPD
EVCTLDELEQVAGSNRAAPSAGGQRATKLAKRHVTLEDLSAPPTVAKAKAPRKRVALVTL
ERNPEQEPPPLPGAMLHGRDVCVMSVGSQPGAATIDALERLVRRHGGRAVANPTPATYAI
VAGRVTFKVRKYMETGRWDVVRDEWLLRAGTEGRLEAFRPEDMLSATEPTRMRLAQQYDR
YGDSYTRPTTPTSFGALLRRMGGDAVEPGRLTDREVVRGERMLLGVRHATRMRLFRGLTG
RLYRAAQAWDGQVAEFRAQRDMLRFVQYGGRWLRDSEPGRARYVFVAPGATATVQEMELW
ADRMAAGEPASGDGTTLLQVRWIGRSIETGQLCDGADFIVAD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaacgatggaatcgttcggcgtgctaagcacgctgctggaaaaggtgcaccat
gctcagcggccgggcaaggaggcggcgctgcgcaagtttttccaggactttgagcgctac
cggcaatcgtgcgaagaagggcccaatcgtccctcgatccacgcgtggctgcggctgctc
ctgcccgggctggaccgtgagcggaaagcgtacgggctgcgggagcgctcgctggccgaa
gcgtacgtccggcgcgctcgggctcgatcggcgcagcgaggatgtgcagcggctgctctc
ggctgccacgacgacctggcgacccggctcggttccctgctgcatgggccgctgcccggc
ggtgggcgatctgaccgtggcggacgtgaacgctcgaacctgcggctcgcggtgagcagc
cggcggatactgcagctgtaccatccgagcgccccaacgatttacgacggtgcgagcgac
ctgaagcagatggtggagcagatcgagagcagacaggcggcggcgaatgagctggacgag
ccggacggagtgatccggccgctgcacttcgtgcgcccgatgcttgccagctggctggag
ctgcgccaggtcggggagctgctgcgccgcgacgcctactggctcgagacgaagatggac
ggcgagcggttccaggtgcactgggacggcgagacgttccggtactactcgcgcaacggg
cacgactacagcgagtcgttcgggcggagcgcagaccaggtcnggggcacactgacgccc
atgctggccaccctgctcgccccctccgtcnnggtcgctcgtgctggcggcgagatgatg
gtgttcgatcggcgcacgctccgctaccgggacaagtgcgacggcacggacgtgaaggca
ctgcgcccgggcaacacccagctgcgaccctgcttctgtgcgtacgacgtgctgcatcac
aatggccgctcgctcgccggcgtaccgtacgccgagcgggcccgcctgctcgccgaatcg
gtgcgcgaacagttcggcttcctcgagcggtgccggcgggggcgggtgcgcgacccaccc
cacctgctcgagctgatcaacggcgcgatcgacgagcggcaggagggcgtggtgctgaag
cgcgaggacgcaccgtaccggccgaatcggcgggccggcaccggctggtacaagatcaag
ccggactacgtcgacgggctagtggtggacttcgatctgctcgtgctgggcggcttctac
aaccagcgccgcacgtacgtgaacgcgttcctggtggggtggcggcccgcaccacccccc
gccccgatatacctctcggtggcgaaggttgtcgatgggcctggggacgctcgagtgcag
cagctgaccaaaacgctgcggcctcactggcggnacgggccggccgacggtggcgatggt
ggtacggtggtacagtgcggccagaccacgcccgacgtgtggattngccccaccgactcg
atcacgctgcagctgcgcgggtccgagctggtgctgtgggagcgaagcgattcgtacgcc
gccgggtacaccatacgcttcccgcgcatcgtcaccgtccggccggacaagctgccggac
gaggtgtgcacgctggacgagctggagcaggtggcaggcagtaacagagcggccccgagt
gcaggcggccaacgggcaaccaagctggccaagcggcacgtcacgctggaggacctgagc
gcaccgccgaccgtggccaaagcgaaggcgccacgcaaacgggtggcgctggtcacgctc
gagcgcaacccggagcaggaaccgcccccgctgccgggcgccatgctgcacggcagggac
gtgtgcgtgatgagtgtgggcagtcagccgggcgcggccaccatcgacgcactcgagcgg
cttgtgcggcggcacggtggccgggccgtcgccaacccgaccccggccacgtacgccatc
gtggccgggcgcgtcaccttcaaggtgcgcaagtacatggagacgggccgctgggacgtg
gtgcgggacgaatggttgctgcgagccggcaccgagggtaggctggaagcgttccggccg
gaggatatgctcagcgcaacggagccgacgcgcatgcggctggcgcaacagtacgaccgg
tatggggactcttacacgcgtcccaccacaccgacctcgttcggcgccctgctgcgccgc
atgggaggcgacgccgtcgagccgggccgcctgaccgaccgggaggtggtacggggcgag
cggatgctactgggcgtgcggcacgccacccgcatgcgtctgttccggggtctcaccgga
cggctgtaccgggccgcgcaagcgtgggatgggcaggtcgccgagttccgggcccagcgg
gacatgctgcgcttcgtgcagtacgggggccgctggttgcgcgactccgagccggggcgc
gcgcggtacgtgtttgttgcgcccggcgctaccgccacggtgcaggagatggagctgtgg
gccgaccggatggcggccggtgagccggcaagcggggatggcacgacgttgctgcaggtt
cgctggattgggcgctcgatcgagacgggccagttgtgcgatggggcggattttatcgtt
gctgactga
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