Astyanax mexicanus (Mexican tetra): 103021383
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Entry
103021383 CDS
T05042
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103021383 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103021383 (hnrnpa1b)
03041 Spliceosome [BR:
amex03041
]
103021383 (hnrnpa1b)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103021383 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
103021383 (hnrnpa1b)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
hnRNP proteins
103021383 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103021383
NCBI-ProteinID:
XP_022532789
Ensembl:
ENSAMXG00000006296
LinkDB
All DBs
Position
13:complement(882433..889240)
Genome browser
AA seq
373 aa
AA seq
DB search
MSNESKARGPEQLRKLFIGGLSFETTDDSLRAYFEQWGTLTDCVVMKDPNSKRSRGFGFV
TYANVEEVDAAMNARPHKVDGRLVEPKRAVSREDSNKPFAHMTVKKIFVGGIKEDTEESH
LRDYFDQFGRIEAIEIMVDRGSGKKRGFAFVTFSDHDSVDRIVIQKYHTINGHNSEVRKA
LSRQEMQNSSMRGGGRGGGGGGGNFGGRYGNDGYNNDFRGGRDDFGGRGGRSNYGGGDNY
NNGFGGSSGGGYGGGDGPGYGGNRGYGGGQGYGNQGGGGGGGGYGGGGNGYDNYNNGGGN
YGGSNFGGSGGGGSGNYSDFGNYNNQQSSYGPMKGSFGGSGGGRNSGPYGGGYGGSSGGG
GGGYGGSGGGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgagagtaaagcacgaggtcccgagcagctcaggaagctgtttattggaggc
ctgagcttcgagacgacggacgacagtctgagggcctattttgaacaatggggaacactg
acggactgtgtggtcatgaaagacccgaactccaaaaggtccaggggcttcgggttcgtc
acctacgccaatgtggaagaagtagatgctgccatgaacgcacgcccccacaaagtggac
gggagactcgtggagcccaaacgagccgtgtccagagaggactccaacaaaccctttgca
cacatgaccgtaaaaaagatatttgtgggcggcatcaaagaagatacagaggagtcccat
ctccgcgactacttcgaccagttcgggaggatcgaagctattgaaataatggtcgaccgc
ggctctggaaagaaaagaggctttgccttcgtcaccttctcagaccacgactcagtagat
cgcatcgttattcagaaatatcacacgataaacggccacaactctgaagtgaggaaagct
ctctccaggcaggagatgcagaattccagcatgagaggaggaggacgcggcggtggtggt
ggtggaggaaacttcggtggtagatacggtaacgatggttacaacaacgacttcagaggt
ggccgagatgacttcggtggtcgaggtggaagaagcaactacggtggtggagataactac
aataatggatttggaggcagtagtggtggtggttatggtggtggagatggccctggctat
ggaggaaaccgtggatatggtggtggacagggctatggcaaccaaggtggtggaggagga
ggaggaggatatggcggcggtggaaacggctacgacaactacaacaatggtggaggaaac
tacggaggaagtaactttggaggaagtggtggtggtggcagtggaaactacagtgatttt
ggcaactacaacaaccagcagtccagttatggcccaatgaagggaagctttggtggtagt
ggaggaggcaggaacagtggcccatatggtggtggatatggaggcagctctggaggggga
ggtggtggatacggtggttctggtggaggcagacggttttaa
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