Astyanax mexicanus (Mexican tetra): 103021427
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Entry
103021427 CDS
T05042
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103021427 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103021427 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103021427 (nbn)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103021427 (nbn)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103021427 (nbn)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103021427 (nbn)
BRCA1-C complex
103021427 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
103021427
NCBI-ProteinID:
XP_022529955
Ensembl:
ENSAMXG00000001881
LinkDB
All DBs
Position
6:3090667..3110411
Genome browser
AA seq
822 aa
AA seq
DB search
MWILQPAESEPGTFYLLPGKEYVVGRKNCDILLANDQSISRVHAQLTVADQTVTLKDSSK
YGTFVNDEQLTTNSTKTVHDGDRLTFGVFQSKFRLKLNSMVVCSSCVDNEGKAALSKAVQ
SVGGRLVNSWSPDCTHLVMPTVKVTIKTICALLCCRPIVKAEFFTELSRAVQRKEKVLPA
AQNFKPEIDEPSLTKQDVDLDPRPERKSLFRDKTFVFLNVKQMKRLSQAITCGGGVTQLL
EEGSLPLPLLQSTGTCVIDVGAGASQALVPPATKKWVDSVGQVLHRNGLRFIAESEIGLA
AIYVSNQTYCNPCASPDSESVRARPAIAASTLSQNATVDETVLAGASQNITAYVVNTEPS
QGLDRMDVGGPTAVGETPEKRSEQAKPLRATRPPSTSFRKPPPTMQPPAPRSPPEPKSSL
SSTEEVKEKTKGESAPPERLSAPLKNSSSSLKKSPQKQSSLTSFFQPASKKRPREGSADS
QLSEAKLSRREEEDEENQKKQISSTSRTPINSQTGQKLQSGSSQRSDFSASLGLGFGLGS
GDPVPDQNLDSSLLSNSKKRKEPVKDSVEPADNLDLDVSLEELESLMSEDMDEPVQAVAS
KKQRLDRGENSTASKREDTSSSNQKKLSLDRRSQNLEHRDSEKKLQESRRMTDLEKDEGR
SVQKKDRYESEDVKDEEVSFVVESKANQNGFIKDNTVAPKQEPKVSSSVSASENDADLPR
KLLQVEFKSLTVSAPSRPKPGPLQSRDLNGKNFKRFRKVPVPGLEGLPNIIGGSDLVAHN
RSKSSELEEWLRDAAEEEKRQEQEETLGDDLFRYNPKPSRRR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccttcagcctgcagaatcagagccagggacgttctacttactccccggtaaa
gagtatgtagtgggtcggaagaactgtgacatcctcttggccaatgaccagtccatcagc
cgtgtccacgcccagcttacagtcgctgaccagacggtcacgctaaaggacagctctaaa
tatggcacttttgttaatgatgagcagctcacgaccaactccaccaagactgtgcatgat
ggtgaccgcctcacttttggggtcttccagagcaagttcagactgaagctgaactctatg
gtggtctgttcatcctgtgttgataatgaggggaaggctgcgctctccaaggctgtgcag
tctgtcgggggaagactggtcaactcctggtcaccagactgcactcaccttgtcatgccc
actgtgaaggtcaccattaagacgatctgtgccctgctgtgctgtcgacccatagtgaaa
gcagagttcttcactgagctctctcgagctgtgcagcgcaaagaaaaagtcctccctgca
gcccagaactttaagccggagattgatgagcccagtctgactaagcaggacgtggatctg
gatcctcggcctgagagaaagtctctcttcagggacaaaacctttgtcttcctcaacgtc
aaacagatgaaacgtttaagtcaggccatcacttgtggaggtggggtgacccagctgtta
gaggaggggtctctgcctctgccgctgctgcagtccactggaacttgtgttattgatgtg
ggagcaggagcttcacaagcactcgtacctcctgccaccaagaaatgggtggactctgtg
ggccaggttttacacagaaatggtctacgcttcatcgcagagtctgagattggattggct
gccatctatgtcagtaatcagacctactgtaatccctgtgcctctccggactctgagtct
gtaagagcaaggccagccattgctgcatcaaccctttcccagaatgcaacagtggatgag
actgtactagctggagcctcgcagaacatcacagcatatgtggtcaacactgaaccctct
cagggtctagacaggatggatgtaggtgggcccacagctgtgggagagaccccagagaaa
cgctctgaacaggcaaagccactgagggcaacacgtccgccatcaacctcattcagaaaa
ccgccaccaaccatgcagcctccggccccccgctcccctccagagcctaaatcatcactg
agctccactgaggaggtgaaggagaagacgaagggagaatcagcacctcctgagagactc
tcagcccctctgaaaaactccagctcctcccttaaaaaatccccccagaaacagtcgtcc
ctcacaagcttcttccagcctgccagcaaaaagaggccacgtgaaggcagtgcagattcc
cagctttctgaagcgaagctctccagacgagaggaggaggatgaggagaaccagaagaag
caaatttcgtccaccagccggactcctataaactcacaaacaggccaaaagctccagagt
ggctccagccagcgctctgatttcagtgccagtctgggtttgggctttggactcggcagt
ggtgaccctgttcccgatcagaacttagattccagtcttctctcgaacagtaagaagagg
aaggaaccagtgaaagactctgtggagcctgcggacaatttagatttagatgtttcacta
gaggagctcgagtccctcatgtctgaggacatggacgaacccgtgcaggcggtggccagt
aagaaacagcgtttggatcgaggagagaacagcacagccagtaaacgagaggacacttca
tccagcaaccagaaaaagctaagtctagacaggaggagtcagaacctggagcatcgggac
tctgagaagaagctacaggaatccaggagaatgactgatttggagaaggatgagggacgt
tcagtgcagaagaaggatagatatgagtctgaagatgttaaagatgaggaagtgtccttt
gttgtggaatctaaggcgaatcagaatggcttcatcaaagacaacacagtggcgcccaag
caggaacccaaggtttcaagctctgtatctgcatctgagaatgacgctgatcttccccgg
aaactcctgcaggttgagtttaagtccctgactgtgagcgccccctcaaggccaaagcct
ggtcctctacagagccgtgatctgaatgggaagaacttcaaacgcttccgcaaggtaccc
gtacctgggcttgagggcttgcccaacatcatcggtggctcagatctggtggctcacaac
cgcagcaaaagctctgaactggaggagtggctgagagatgcagcagaggaggagaaacga
caggagcaagaggaaactcttggagacgatctgttcaggtacaatccaaagccctccaga
agaagatga
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