Astyanax mexicanus (Mexican tetra): 103021434
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Entry
103021434 CDS
T05042
Name
(RefSeq) retinoic acid receptor RXR-beta-A
KO
K08525
retinoid X receptor beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03320
PPAR signaling pathway
amex04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103021434
03320 PPAR signaling pathway
103021434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103021434
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103021434
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103021434
Nuclear receptors [BR:
amex03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103021434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
103021434
NCBI-ProteinID:
XP_022538693
Ensembl:
ENSAMXG00000013864
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All DBs
Position
23:6922288..6947156
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AA seq
463 aa
AA seq
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MGDSRDSRSPDSSSVSSPASGQHSPPFAPSAAAMTSLPPISSAVNSPISSIGSPFSVISS
SMGSPCIPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPYGLKPLSGHSPGPTLS
QKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECMVDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRNKERDGEVESTSVVNEEMPVEKILEAEMSVEQKTEMHTD
GSSGTSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDREGAHNAEVGAIFDRVLTELVSKMRD
MQMDKTELGCLRAIILFYPDAKGLSSPSEVELLREKVYASLESYCKQRYPDQQGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtcgagattctcgcagtccagacagttcttctgtgtcatcaccagcgtct
ggtcagcactcacccccatttgcaccttcagcagctgccatgacttcactgcctcccatc
tcatcagctgtcaacagccccattagtagcataggatcacccttttcagtcatcagttct
tctatgggctccccatgcatacctgggacaccttctgtgggctatggtcccatcagcagt
ccacagatcaactcaacagtatcgatgtctggtctgcatgccgttagcagttcagatgat
gtaaaaccaccatatggcctgaagccactttcaggtcacagtccaggaccaacgctttct
caaaaacgtctttgtgcaatttgtggggaccgatcttctgggaagcactatggtgtgtac
agctgtgagggatgtaagggcttttttaagcgtactgtaagaaaggacctgagctacact
tgcagagataataaggaatgtatggtcgacaagcgtcagaggaatcgctgccaatactgc
cgctaccagaagtgcctggctatgggcatgaagagagaagccgttcaggaagagcgtcaa
aggaacaaagagagagatggtgaagtggaatctactagtgtggtgaatgaggagatgcca
gtagaaaaaattctggaagcagaaatgtctgtagaacagaagacagaaatgcatacagat
ggaagctcagggaccagctctccaaatgatcccgtcactaatatttgccaggcagctgac
aaacaactcttcacactggtcgagtgggccaagaggatcccgcacttctctgaactgcca
ttggatgatcaagtcatccttctacgtgcgggctggaatgagcttttaattgcctcattc
tcacatcggtccatctccgtgaaggatggaattctgttggccaccggtctccatgtccac
aggaacagtgcacacagtgcaggggttggagccatcttcgacagggagggtgcgcacaat
gcagaggttggggccatatttgacagagtgctgactgagctagtgagtaagatgagggat
atgcaaatggataagacggagttgggctgtctgagagcaatcatccttttttacccagat
gctaaagggctgtccagtccgagtgaagtggagttgctgagggaaaaggtctatgcatcg
ctggagtcttactgcaaacagagataccctgaccagcaaggaagatttgccaaacttcta
ctccggctaccagccctacgatccattggcttgaagtgcttggagcacctgttctttttc
aaactgattggtgatacccccattgacacttttcttatggaaatgctggaggctccacat
cagttgacctaa
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