Astyanax mexicanus (Mexican tetra): 103021455
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Entry
103021455 CDS
T05042
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103021455 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103021455 (bbs4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
103021455 (bbs4)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
BBSome
103021455 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
ANAPC3
TPR_14
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_7
ARM_TT21_2nd
TPR_15
TPR_Slam
ARM_TT21_4th
NatA_aux_su
TPR_10
ARM_TT21_N
PknG_TPR
ARM_TT21_C
Wzy_C_2
TPR-S
TPR_20
HrpB1_HrpK
Coatomer_E
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
TPR_MalT
Rapsyn_N
Clathrin
Motif
Other DBs
NCBI-GeneID:
103021455
NCBI-ProteinID:
XP_022528146
Ensembl:
ENSAMXG00000019249
LinkDB
All DBs
Position
2:complement(48851004..48867450)
Genome browser
AA seq
535 aa
AA seq
DB search
MADEETVKADAPLPVATDPKKPRLKKAPELPILERRNWLIHLHYIRKDYETCKAIIKEQL
QETQGMCEYAVYVQALILRLEGKIQQSLELFQSCAILNPTSSDNLKQVARSLFLLGKHKA
AIEVYNEAARLNQKDWEISHNLGVCYIYTKDFKSAEEQLNLALQLNKHDMTYMMLGKIYL
LEGDTEKAIEIYKKAVEFSSENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPNNYKAI
LAAGSMMQTHGDFDVAMNKYRVAAFTVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYL
SPFDWKILYNLGLVHLTMQQYASAFHFLSAAINLQPRMGELYMLLAVALTNLDDVDNARR
SYEQAIQLDTSNPLVNLNFAVLLYNQGDKKAALQQYQEMEKKVNMLVESNSNTEFDPELI
EMAQKMGAALQAGENLFWSKPGKESKNSQHSSSNKSASSQQPLGTNQALGQAMSSAAGYS
KSIRLATEPEPDVESAPSPPTEPPGEAEAEDDVEEAVEPPKAKEKKKSKPKAVAE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaggagacggttaaagcggatgctccgctgccggtggccactgaccctaag
aagcctcgtcttaaaaaagccccagaacttccgattctagagaggagaaactggctcatt
catcttcactacatccgcaaagactatgagacctgcaaggccatcattaaagagcagctc
caggagactcagggcatgtgtgaatatgctgtttatgtccaagctctgatcctgcgtttg
gaggggaagatccagcagtcgctagagctgttccagagctgtgccatcctaaaccccacc
agctctgataatctcaaacaagtggcccgctccctgtttctcttagggaagcataaggcc
gctattgaagtttacaatgaggcggcccgtctcaaccagaaggactgggagatcagtcac
aatcttggagtttgctacatctacaccaaggactttaagagtgctgaggagcagctcaac
ctggcactgcagctaaacaaacatgacatgacctacatgatgctgggaaagatctacctg
ttagagggagacacagagaaggcaatagaaatctacaagaaagctgtggagttctcctca
gagaacacagaactgctgaccacactggggctgttgtacatgcagcttggaaaatatcaa
aaagcctttgaacacctcgggaatgcactgacgtacgacccaaacaattacaaggccatc
ctggcagcaggcagcatgatgcagacgcatggggatttcgacgtggccatgaataaatat
cgcgtggcagcgttcacggtgcctgagagcccccctctctggaacaacatcggcatgtgc
ttcttcggaaagaagaaatatgtagctgctataagctgtctgaagagagcaaactacctg
tctccgtttgattggaagatcctgtataacctgggtttggtgcaccttaccatgcagcag
tacgcctcagccttccacttcctcagtgctgccattaacctgcagccacgcatgggagag
ctgtacatgctcttggcagttgctctgacgaatctggatgatgtagacaatgcacgcagg
tcctatgaacaagccattcaactggatacgtccaaccctctggtgaatctgaattttgca
gtgttgctgtataatcagggagacaagaaggctgcactacagcaataccaagagatggag
aagaaagtcaacatgttggtggagagcaacagcaacactgaatttgacccagagcttatt
gagatggcgcagaagatgggtgcagccctgcaggcgggggagaatttattctggtctaaa
ccaggaaaagaatctaagaacagccagcattcctcttccaacaagtctgcttcttcccag
cagccactaggcaccaatcaagctttgggccaggccatgtcttctgctgctggttacagc
aagagcattcggttagctacagagccagagccagatgtggaaagcgccccgtctcccccc
acagagccccccggggaagcagaggctgaagatgatgtagaggaagccgtggagcctcct
aaagccaaagagaagaaaaagagcaaacccaaagcagtggctgaatag
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integrated database retrieval system
