KEGG   Astyanax mexicanus (Mexican tetra): 103021468
Entry
103021468         CDS       T05042                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03022  Basal transcription factors
amex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103021468 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103021468 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103021468 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103021468 (gtf2h3)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103021468 (gtf2h3)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103021468 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 103021468
NCBI-ProteinID: XP_007238324
Ensembl: ENSAMXG00000013629
UniProt: A0A8B9JVM2 W5L2F8
LinkDB
Position
22:complement(2998390..3011056)
AA seq 301 aa
MASEDEVSLLVIVVDVNPIWWGQQAQREPEFNLSKCLDAVMVMANSHLVMTRTNKLAIIA
SHCQESHFLYPNKHWKAGDVAGDEVSSGSGDGKYELLSVANDLVAEEIRNLMARTQVKGH
QTDTLLAGSLAKALCYIHRVSKELEAGQDMKSRILVVKAAEDCALQYMNFMNVIFAAQKQ
NILIDACVLDSDSGLLQQACDITGGLYLKIPQKAALAQYLLWVFLPDADQRSQLVLPPSV
HVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQMMKPKKKKLKTA
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcctcagaagatgaggtcagtcttctggtaattgtggtggatgtcaacccaatttgg
tggggtcagcaggcacagagagaacctgagtttaatctctcaaaatgcctggatgctgtg
atggtcatggcaaactctcacttggttatgaccagaaccaacaaactggccatcattgcc
agccattgtcaggagagtcactttctgtacccaaacaagcactggaaagcgggggacgtt
gcaggggatgaggtgtcgtctggcagtggtgatggcaaatatgagctcctgtctgtagcg
aatgatctcgttgctgaggagatcaggaatctcatggctagaacacaggtaaaaggtcac
caaacggacaccttactggctggatctctcgccaaagctctctgctatattcacagagtc
tctaaagaactggaagctggccaagacatgaaatccaggatattggtggttaaagcagct
gaggattgtgctctgcagtacatgaacttcatgaatgtaatctttgctgcacagaaacag
aatattctgattgatgcatgtgttctggactctgactcgggtcttttgcagcaggcttgc
gacataactggaggcttgtacctaaagattcctcagaaggccgcactagctcagtattta
ctgtgggtattcctgccagatgcagaccagcgttcccaattagttcttccaccctcagtt
catgtggactacagagcagcatgcttctgtcatcgcaacctcatagagatcggctacgtt
tgctcggtttgcctgtcgatattctgcaactttagtcctatctgtacaacatgcgagact
gccttcaagattcccttaccacagatgatgaaaccaaagaagaagaaacttaaaactgca
aattaa

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