Astyanax mexicanus (Mexican tetra): 103021642 Help Entry 103021642         CDS       T05042                                  Symbol acana Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:amex00535]     103021642 (acana)    00536 Glycosaminoglycan binding proteins [BR:amex00536]     103021642 (acana)    04091 Lectins [BR:amex04091]     103021642 (acana) Proteoglycans [BR:amex00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    103021642 (acana) Glycosaminoglycan binding proteins [BR:amex00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    103021642 (acana) Lectins [BR:amex04091]  C-Type lectins   Lecticans    103021642 (acana) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set EGF_TEN hEGF I-set Motif Other DBs NCBI-GeneID:  103021642 NCBI-ProteinID:  XP_022520939 Ensembl:  ENSAMXG00000007573 LinkDB All DBs Position 23:complement(1389348..1423255) Genome browser AA seq 1538 aa AA seqDB search MTSMLLLFLFLRITSATWSFQDYMYTEPESTLSVSIPTEGPLHPLMGDTLVLPCYFLDNT VHDPGSPTIAPLSHRIKWSLVTKETTVDILVASEGTVALNSKYTDRVTMVGYPQTPTDAS IKISELLSNDSGVYRCEVMHGIEDSHDTAEVQVQGIVFHYRAITSRYTLTFEKAKAACIQ NSAVIASPEQLQAAYDEGYHQCDAGWLADETVRYPIHDPREPCYGDKFEYPGVRTYGVRD VNETYDVYCFAEKMTGRVFYSMSPEKFTFDEAEAQCAKLGAKLATTGQLYLAWKAGMDVC NAGWLADRSVRYPINIARPQCGGGLLGVRTVYRFPNQTGYPLPDSRYDAICYSDEEEVGS GRGPVVVGMVTDRPQEFLKPTPAAESEVAGEVVTHKPPTDCTQKPLSPPPSTVATPTEHG PKAPCANLTEAVMSPTGVVFHYKVSASRYSLTFAEAQLACQNIGAVIASPQQLHSAYEAG YHHCDAGWLIDQTVRYPIVSPRDQCSGDLETVPGVRNYGVRPASERYDVYCYMDKPRGEV FIVSSFEGFTYDEAVASCQGQNASLASTADLHAAWKQGFDKCRAGWLLDHSVRYPINNPR PQCGGGKPGVHTVYAFPNQTGYPDLHSKYDAYCFKADVQLQLPETETNETVVEEEIVVVT SAPNLLAPVTPPSAPPTSAEPSGSAEIPSGVSGSGDASASGSGAQPSGSGDQPSGSGDQP SGSGDQPSGSGAQPSGSGDQPSGSLDQPSGSGAQPSGSGDQPSGSGDQLSGSGDQVSGSG FQPSGSEEQPSGSGFQPSGSGEQPSGIEFQPSGSGFQPSGSGEQPSEALGTVESLSGSGF SGDISGSGLSGDGSGILVTFSGSESILSGFASTSGTPQEAGEGSAEILTFIPGLGSGLFS GEGSASGSGSGSGFSSEESGSASFSSSGESDESGELSGISSGLGSSEEFSGFSGFPSGLF PSGDYSGGFSGLSGSGSGIVMLNGQWVEGFVGPVRTAQELGGAQVDFSGSGDSSGDSGSG MSGSFSGVSGDISGESGNFGTSGDSGDSGSGSGFPGVTFLGSGFTDFTAPLDKDQEASGI LLYGSGEGSGFLSGVSGDTSGASASRDVPLLFTDDSMEEFSVTPTQSQELGKGPIEISGS VSGSGFRSGLLASGDHHTVTDSSLHHATASPSEEPSEVLSNEVQIGFLSAQGPSGLLSDT AGPQEGPSEPLESIWTSTTSAPRAVPTTEPSFSLQIPAVMEMPTTENVALDPCNPNPCGR GSCSVQDGIGLCHCPPGLAGDECQFEVDVCHSNPCANGATCVEVEDSFKCLCLPSYGGER CEIDVDTCAEGWTKFQGHCYLHFSERQTWEEAEQHCRSLGAHLVSITNREEQFFVNSHAQ DYQWIGLNDKTFENDFQWSDGTPLQYENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPC NYHLPFTCKTGPVLCGQPPEVKNARMFGNKKEHYQVNSVIRYQCNDGFRQRHPPVVRCMA DGHWQKPQVECIAHISSRRQKRSVQRKSARRSSLKPHL NT seq 4617 nt NT seq  +upstreamnt  +downstreamnt atgacgtcaatgctgttattattcttgttcctccggataacatcagctacatggtccttc caggattacatgtacaccgaacctgaaagcactctgagtgtcagcattcccactgagggt cccctccacccgctgatgggggacacactggtcctgccctgctacttcctggataacacg gtccatgaccccggttcccccaccatcgccccgctgtcccaccgcatcaaatggagcctc gtaaccaaagagacgaccgtggacatcctggtggcctctgaggggactgtggccctcaac agcaagtacacggacagggtaacgatggtgggatacccccagacccccaccgacgcctcc attaagatctcagagctcctctccaacgactcgggggtgtaccgctgcgaggtcatgcac gggatcgaggacagccacgacaccgccgaagtccaggtgcaaggtattgtgttccactat cgcgccatcaccagccgttacaccctgacgtttgagaaagcgaaggcagcctgtatccag aacagcgccgtgatcgcgtctccagagcagctgcaggcggcttatgacgagggctaccac cagtgtgatgccggctggctcgccgacgagaccgtcaggtatcctatccacgatccccga gagccctgctatggtgataagtttgagtatccaggggtcaggacgtatggagtgagagat gtaaatgagacgtatgatgtgtactgcttcgctgagaagatgacggggagggtgttctac tccatgtccccggagaagttcacctttgatgaggctgaggctcagtgcgctaaactgggc gctaagctagccaccacggggcagctgtacctggcctggaaggctggtatggacgtgtgt aacgccggctggctggctgaccggagcgtccgctatcccatcaatatcgcccggccgcag tgtggaggaggtctgctgggggtccgcactgtgtaccgcttcccaaaccagaccgggtac cctctacctgactcacgctacgatgctatctgctactcagatgaggaagaggtaggttca ggaagaggtccggtggtggtgggcatggtgacggaccgccctcaggagttcctgaagccc acccccgctgctgagagtgaggtcgccggggaggtggtgacccacaaacctcccactgac tgcacccagaaacccctgtctccaccccccagcactgtggccacgcccaccgaacacggg cccaaagccccctgtgccaacctgactgaagctgtgatgtctccaacaggtgttgtgttt cactataaggtcagtgctagtcgttattccctcacgtttgctgaagctcagctggcctgt cagaatatcggagcagtgatcgctagtcctcagcagcttcactcagcgtatgaagctggt tatcatcactgtgatgcaggctggctgatcgaccagaccgtcaggtatcctattgtatcc ccacgtgatcaatgctctggtgatctggagacggtgccgggcgtgaggaactatggagta cggcctgccagtgagcgctatgacgtgtactgctacatggacaaacccagaggggaagtt ttcattgtgagttcattcgagggattcacatacgatgaagcagtggcttcctgccagggt cagaacgcctccctggcctccacagccgatctgcatgcggcctggaagcagggctttgat aagtgccgagctggctggctcctcgaccacagcgtccgttaccccatcaataacccccgg ccccagtgcggaggagggaagcctggcgtccacacagtctacgctttccccaaccagacc ggctatcctgatctgcactccaaatacgatgcctattgctttaaagctgatgtccagttg cagctccccgagaccgagacgaatgagacggtagtagaagaggagattgtagtcgtcact tctgcacctaaccttcttgctcctgtgacccctcctagtgctccacccacctcagcagag ccctctggttctgcagaaattccatctggagtcagtggatctggtgatgcatctgcaagt ggaagtggagcgcagcctagcggaagtggggatcaacctagcggaagtggggatcagccg agtggaagcggggatcagccgagtggaagcggggctcaacctagcggaagcggagatcag cctagtggaagtctagatcaaccaagcggaagtggggctcaacctagtggaagtggggat caacctagtggaagtggggatcagcttagcggaagtggggatcaagttagtggaagcgga tttcagcctagcggaagcgaggaacagcctagcggaagcggatttcagcctagtggaagt ggggaacagcctagtggtattgaatttcagcctagtggaagcggatttcagccgagtgga agtggggaacagcctagtgaagcattaggcacagtggaaagtctttcaggatctggcttc agtggagatatctctggctcaggacttagtggggatggttcaggcatacttgtgaccttc tcagggagtgaatctatcctgtccggatttgcatccacctcagggacaccccaggaagct ggggaaggaagtgcagagatcctcaccttcatcccaggtctgggctccggcctcttcagt ggggaagggtcggcctcagggtctggaagtggctcaggtttcagttcggaggagagtgga tctgcatcgttcagcagctcaggagaaagtgacgagagtggagaactttcgggaatctcc tcaggactgggttccagtgaggagttctctggattcagtggttttccatcaggcctgttt ccttctggagactacagcggtggtttctctgggcttagcggcagcgggagtggaatcgtc atgctgaatggacagtgggtggaggggttcgtcgggcctgtccgtacagctcaggaactt ggtggagctcaagtggatttcagtggatctggagattcttctggagattctgggtctgga atgagcggctctttctctggggttagtggagatatcagcggtgagtctggcaactttggc acctctggagactctggtgactctggaagtggctctggattcccaggggtcaccttcttg ggttcaggtttcacagatttcacagctccattggacaaagaccaagaggcttctggaatt ttgctgtatggatcaggagaaggaagtggtttcctttctggagtttctggagacacatct ggagcttcagccagcagggatgtaccattgttatttactgacgatagtatggaagagttt tctgtcacacccactcaaagccaggagcttgggaaaggtcccatagagatcagcggcagc gtaagtggaagtggtttcagaagtggacttctagccagtggagatcaccacactgtaact gatagtagtttgcaccatgccacagcttcccccagtgaagaaccatcagaggtcctttca aatgaagtccagattggctttctatcagcgcaaggtccatcaggtctgcttagcgacact gcaggaccacaggagggtccgtcagaacctctcgagtccatctggacgtccacaacatct gcgcctagagctgttcctactactgagccatccttttctctgcaaatcccagctgtgatg gagatgccaaccacggagaatgttgctctggacccctgtaacccaaacccctgtggtcgt ggctcctgttctgtgcaggatggcatcggcttgtgccattgcccacctggcctggcggga gacgagtgccagtttgaggttgatgtgtgccattcaaacccttgtgccaatggagccacg tgtgtggaggtagaggactctttcaaatgcttatgcctgccgagctatggaggggaacgc tgtgagatcgatgtagatacctgtgcggagggctggactaagttccagggtcactgttac ctgcacttctctgagaggcagacctgggaggaggcggagcaacactgccggagtcttgga gctcacctggtcagcatcaccaaccgagaggagcagttcttcgtcaactctcacgctcag gactatcagtggattgggctgaatgataagacgtttgagaacgatttccagtggtcagat ggaaccccgctgcaatacgagaactggaggcctaatcagcctgataattactttaactcc ggggaagactgtgtggtcatgatctggcacgaaaacggccagtggaacgacgtcccctgc aactaccatctacccttcacctgcaagaccgggccagtcttgtgtggtcagcctcctgaa gtgaagaacgccagaatgttcgggaataagaaggagcactatcaggtgaactctgtaatc aggtatcagtgcaacgacggcttccgacagcgccacccgcctgtggtgcgctgtatggca gatggacactggcagaagcctcaggtggaatgtatagcccatatcagcagcagacgacaa aagaggtccgtccagcgtaaatcagccaggagatcatcactgaaaccacacctctaa

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