Astyanax mexicanus (Mexican tetra): 103021796
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Entry
103021796 CDS
T05042
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103021796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103021796
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103021796
Protein recycling
Other Rab GTPase associated proteins
103021796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Ntox15
DUF6279
Cauli_AT
DUF842
LMBR1
Trehalase
DUF948
Motif
Other DBs
NCBI-GeneID:
103021796
NCBI-ProteinID:
XP_007238325
Ensembl:
ENSAMXG00000013619
UniProt:
A0A8B9JY51
W5L2E1
LinkDB
All DBs
Position
22:complement(2983072..2996062)
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AA seq
462 aa
AA seq
DB search
MWAEQKRGIHVSQAELLCKDGCGYYGNPAWQGYCSKCWRERIHKTETSRPENGFHSDGGF
QLTFSKFEEKKNVEKGRRSSTMKRLFWGTPSPPRQESLEGQEAAVKAFQSLEPGDFPGFL
KLLRKPASQRLQSRCTAFLNTIEAYHDLPVEKQSDHVQDFYQNITVHFNGLPEAQVSQMM
EHIEKLIMTRLHKWVFCHDSCDDEQKDLMLQRRIKSLNWVTPQMLRVPFPKCSSDSDPYL
PAITAIIEMDAKRAPQDKLACVSKCSQNVFQALALTNSQPANADDFLSGLVYVVLRANPP
RLHSNMNYITRFGLPHSLMAGETGYYFTNLSCAVAFIEKLDGPALNLTPEEFSRYMQRRS
ALSKPAEADSQRRARENRETLEDLQKRQEKVDQGVRTLQEQLEQWVRSVQEKVEDVAAQS
SLIENSLAECLEKSAAGGRDQSVLVLRDDADLNRADPADTEC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagagcagaaaagaggaatccacgtctcccaggccgagctcctctgtaaagat
ggatgtggttattatggcaatccagcctggcagggttactgctccaagtgctggagagag
agaatccacaagactgaaaccagcaggccagagaatgggttccacagtgatggtggattc
cagctcaccttctctaaatttgaggagaagaaaaatgtggagaagggcagacgctccagt
acaatgaagagactgttctgggggacgccctcaccaccacggcaagagtctttagaagga
caggaagcagcagttaaggcctttcagagtctggaacccggagacttccctggcttcctc
aaactcctgcgcaaaccggcctcccagcggctacagtctcgctgcacagccttcctcaac
accatcgaggcctatcatgaccttcctgttgagaagcagtcagaccatgtgcaagatttc
taccagaacattactgttcactttaatggtctgccagaagcacaggtttcacagatgatg
gaacacattgagaagctgatcatgacacgtctgcacaaatgggtcttttgccatgacagc
tgtgatgatgagcagaaggatctgatgcttcagcggaggatcaagtccttaaattgggtc
acccctcagatgctgcgtgtccccttccccaagtgcagctctgacagtgacccatattta
ccagctattacagccattattgaaatggatgccaagcgagcccctcaggataaactggcc
tgtgtgtccaagtgcagtcagaatgtgttccaggcccttgccttgaccaacagccagcca
gcaaatgcagatgactttctctcaggtctggtttacgtggtgctgagagctaacccacct
cgccttcactccaacatgaactacatcacccgcttcggcctgccacacagcctgatggcc
ggggagacgggctactactttaccaacctgtcatgcgccgtggcgttcatcgagaaactg
gacggcccagcccttaacctcaccccagaggagttcagcaggtacatgcagagacgcagc
gcgctctccaaaccagcggaggctgacagccagaggagagcccgggaaaaccgagagacg
ctggaagaccttcagaagcggcaggagaaagtggaccaaggggtccggactcttcaggag
cagctggagcagtgggtgcggtccgttcaggagaaagtagaggatgttgcagctcagtcc
tcgctgatagagaacagtcttgctgagtgtttggagaagtcagcagccggtggcagggat
cagtcagtgttggtgctcagagacgatgctgatttaaatagagctgatcctgcagacaca
gagtgttga
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