Astyanax mexicanus (Mexican tetra): 103021854 Help Entry 103021854         CDS       T05042                                  Symbol whrnb Name (RefSeq) whirlin   KO K21879   whirlin Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:amex03037]     103021854 (whrnb) Cilium and associated proteins [BR:amex03037]  Primary cilia and associated proteins   USH complex and associated proteins    103021854 (whrnb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 USH1C_N HHD_RTEL1 DUF6288 Motif Other DBs NCBI-GeneID:  103021854 NCBI-ProteinID:  XP_049326273 Ensembl:  ENSAMXG00000036967 LinkDB All DBs Position 22:29076697..29194515 Genome browser AA seq 968 aa AA seqDB search MSAAELERVSLRSAGATSASSGGRALSANVKRLHDALHALLGDAEREQFVHCLNAYHARR NVYDLVRTLRVILDTPRKRQLLPMLRLVIPRADQLLFDQYTSEGLYLKSELLEEPGSAPS DSAEPEPCARTPSVHFSPAHVLPDFSTAHERTAPSLTEARDEVRQVTLKRSKSHEGLGFS IRGGSEHGVGIYVSLVEPGSSAEREGLRVGDQIVTVNEVVFDRVTHGEAVKVLKGCKKLS MTVCSMGRIPGGYVTNHVYTWVDPQGRSVSPPPDLVEHVNGAGGRLTDSQRRGHTHSPHQ GAERRVNISLDDGLPLGLMIRGGAEYALGIYITGVDRGSAAEYGGLKVGDQILDVNGRSF RSIAHDEAVHILKISHHMLMTIKDVGRLPHARTVVDETKWISSPKIAESSASVSVQSLTV DVGAGSSAKTVCCKGVAGPPLAPALVGARNSLEEQAYLLLTETERQTLSYYIQEYQHGHI GVEPLAMALFELFNTHAKLTLLAEVRMLIAVQDLERFDGQVLHREMEAWRARHGGLGLLH PDSICISHPESHGLTACQLTAPATGYAKNECRMDGSMGTGPAGALNALPDIALDEVQSSS ESPPNFRPPPPPPGPAAVRHGSPKGQIKRPSSKLSHTNLLFSTPCRMHQDTNHPQNHVHP HTHSPTSVHTSPCTIHHTTSPCSIRASPPPCSLHHSSPCSVHRNIAPPVGPPAKDLVQFL MSRQAAVLSPHPESPSQSRTGTPTPSLSPRSSPSLSPSLLMPAPPPCSPEKMETSGMAPS PSPSSSQIHRLNPEPEGGEDCPQTQPRGATLSQLSDSGQTLSEDSGVDIAEAGGLSKDSS PRPGQPSPQQASGNLRGTDGSGQASSLQQTGLPEPTLVRVSKSANTLGIAVEGGANTRQP LPRIVTIQKGGSAHLCRQLRVGQVILEVNGVSLKGMEHRDAARLIAEAFKTKEKDYIDFL ITDFNTSL NT seq 2907 nt NT seq  +upstreamnt  +downstreamnt atgagcgcggcggagctggagcgcgtgtccctgcgctccgcgggcgccacctcggcgagc tccggcggccgcgcgctctccgccaacgtgaagcgtctgcacgacgcgctgcacgcgctg ctgggcgacgcggagcgcgagcagttcgtgcactgcctgaacgcgtaccacgcgcggcgc aacgtgtacgacctggtgcgcacgctgcgcgtgattctggacacgccacgcaaacggcag ctgctgcccatgctgcgcctggtcatcccgcgcgccgaccagctgctcttcgaccagtac acgagcgaggggctctacctgaagagcgagctgctggaggaacccgggagcgcgccgagc gatagcgcggaaccggagccctgcgcgcgaaccccgtccgtgcacttcagccccgcgcac gtgctgccagacttcagcaccgcgcacgagcggacagcgccctcgctgacggaggcgcgc gacgaggtgcgccaagtgaccctgaagcgcagcaagagtcacgagggtctgggcttcagc atccgcggcgggtccgagcacggggtgggcatctacgtgtctctggtggagccgggatct tccgcggagagagaggggctgcgcgtgggggaccagatcgtcactgtcaatgaagtggtg tttgaccgggtcacacacggagaagcagtgaaggtgctgaaaggctgcaagaagctctcc atgaccgtctgttcgatggggcggatccccggaggctacgtgaccaatcacgtgtacacg tgggttgaccctcaggggcgcagcgtctccccacccccagacctggtggagcacgtgaac ggagcaggaggacggctcaccgacagccagagacgtggacacacacactcaccacaccag ggggcagagaggagggtcaacatctccttggatgacggtcttcctctgggtctgatgatc cgcgggggagcggaatacgccctgggcatctacatcactggagtggaccgaggatctgct gcagagtacggaggactgaaggttggagatcagatcctggatgtgaatggtcgcagtttc cgcagtattgctcacgacgaagccgtccacatccttaagatctcccaccacatgctgatg accataaaggacgtgggtcggctccctcatgcccgcaccgtggtggacgagaccaagtgg atctccagcccgaaaatcgctgagagttcagccagtgtgtctgtacagagtctgacggta gatgtcggggctggaagttcagcaaagacggtgtgttgtaaaggtgtggccggcccacct ttggcaccagcgctggtgggagcacggaactctctggaggaacaggcttatctgctgcta acagagaccgagagacagaccctcagctactacatacaggagtaccagcacggccatatc ggagtggagcctctagccatggctttgttcgagctttttaacacacatgcaaagctcacc ctgctggcggaggtgcgcatgctcatcgccgtgcaggatctggagcgctttgacgggcag gtgctgcaccgtgagatggaggcatggagggcgaggcatggggggcttggccttctgcac cccgactccatctgcatctctcaccccgagagccacggcctgactgcctgccagctgact gctccagccacaggctatgctaagaacgagtgccggatggatggaagcatgggaacagga cctgccggcgctctgaatgccctgccggatatagctttggacgaggtgcagtcttcatca gagtcgccccctaatttcagacccccgccgcctccccccggtcccgcagccgtcagacac ggcagccccaaaggccagatcaaacgaccctcgtccaaactctcccacaccaacctgctc ttctccaccccctgcaggatgcaccaggacaccaaccacccccagaaccacgtgcacccc cacacccactcgcccacttcagtccacacctcgccatgcaccatccaccacaccacctca ccctgctccatccgtgcctctccgcccccctgctccctccatcactcctccccctgctct gttcaccgcaatattgcccccccagtcggacccccggccaaagacctggtccagtttctc atgagccggcaggcggctgtgctgtccccgcacccggagtcccccagccagtctcggaca ggcacccccacccccagcctgtctcctcgctcgtctccgtccctctcgccctcgctgctg atgccagctccgcccccctgcagcccggagaagatggagacctccggcatggctccatct ccaagccccagttcatctcagatccacagactcaacccagagccagagggaggggaggat tgtccacaaacacaacctcgaggtgccactctctcgcagctgtcggacagtggacagact ctgagtgaggacagtggggtggacattgcggaggcgggggggttgagtaaggatagcagc cccaggcctgggcaaccttcacctcagcaggcttcaggaaacctgagaggaacagacgga tctggacaggcctccagcctccagcagacagggctacctgagcctactctggtacgagtg tccaagagtgccaatacattaggcatagcagtggagggaggtgcgaacacgagacagcct ctgcctcgcatcgtcactatacagaagggtggctcggcgcacctctgcagacagttacgg gtgggacaggtgattctggaggtgaacggcgtgtccctcaaaggcatggagcatcgagac gcagcgcgcctcatagccgaggccttcaagaccaaagagaaggattacatcgactttctg atcacagacttcaatacctccctgtag

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