Astyanax mexicanus (Mexican tetra): 103021863 Help Entry 103021863         CDS       T05042                                  Symbol rif1 Name (RefSeq) telomere-associated protein RIF1   KO K11138   telomere-associated protein RIF1 Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:amex03032]     103021863 (rif1) DNA replication proteins [BR:amex03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     103021863 (rif1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rif1_N Phage_TAC_6 Motif Other DBs NCBI-GeneID:  103021863 NCBI-ProteinID:  XP_007253540 Ensembl:  ENSAMXG00000010910 UniProt:  A0A8B9L0C6 LinkDB All DBs Position 11:29287811..29307513 Genome browser AA seq 2429 aa AA seqDB search MMATVPLSSSSLLPLLESLEDDAAGASEQTDAYLTIANRLSGEDGRQFFPIIVKHFSRLG KSLQTHISSENEELSQAALQALGFCVFNTNIVSGIPAHFAEEILLALCALVLKSTDKNTC TRALWVISKQNFPAEVVSKKTPEILKTLDAMQTRDIQSILMEHESLNVVIKLLDQAPTQM GQGAVFWAKLVIPLVVHSASKVRLRAAAALEMGLPLLLEKQQEVAAIVEPMMSTKLIPEM QKLFSTKNESNVLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRSSSPNIKKIAFLAW KSLIDNFALNPEILCSSKRLKLLMQPLSSILVRTEALLLTKLEVWWYLVVKLGPNLATNF EQVALPLLQNTLSPDGSLQGPATPARNSSQSNGVGLSTPKSSVPSCSTPGANPRLSLNSS TMSLNSSTNVQQSYTSIQLLGLEMLLHYFLGSQATSAAAKNKLQLNLEPLTHNLLSSQSF FSKHSSTFISSVKNAFMAVGKDAPEPLLSLIWNSLVNLVSTTIETAGNKKERQGSEVLTH LLQALQSILSSEALPAPRALALLEATVKGIPQKVLGSAAYQVANMDVLNGTPALFLILLF YNSNMLSSFLADEKFFLCLETLVSCGLSGPTSPLAFVEAVLGTISRNVEAVENKEHLWRM WSVVVNPLTDTITQTNEVNQGDALEHNFSAIHSALMFPITHLLPGSALPQMTQKSMLSTW SRLYKAFARCSALVATAEENVCCEELCTKISATLDGQALKTLSTLDAVANILHSIVDSVD FSPFTPQFQQKMKSPHTPLGWVRKRNNALGNLSKFHVLLVQSLDALQHLNSSNDGGAVLS SIGSMLISVVSTLFTSLALPTVIHESLSSLTKALALLYEQVESSDDEQSKSHSVLGSKLE KLAGEMLGCLQTRSALLYDDDLLAVLSPLLCVLFPHKNKQIRLSVTQFWNATFGNALTLT YPEMLTPVLSQAKQKAPLILPGFEAVGNSEDFSGEISSECSQLDTKISGIKVTPAAKRES LLAKAGEIKERSSTTSKPVSVKLDFGSPKPPRREVLEEEASVDFVFIPPESKKRVLTEHQ KEVKRTKRDDIPAMYNNLDASLDTTVFTQYTQSQEESLDKLPADESQDKVNKVETKGSDT EESSVSDSKEAENNVCPENDSPEKVTNNADGDTEMQSPPGDLPVSDAGEHEDTTAKDHSP NVSGSSDMISGTPPKSSSRRQSFITLEKYVEPRPASPMSVTKFTGPLTRTSHSQETPKSE HLSPKASSHSQLEAGTGAGDSAPQTEKENVEMETEMTSVANHSNEGTGDEEDVIPDTQTQ VLNGAVDDEADNSLDKSQVEMEIEASPEGPSEGHSPVSNSSQAEPRRSGRRRSKPVRPGE EELKSKQQKKDFVDSSALPVTEKPAPTKQDENVLPGRSRRGKVLEENKGELENHSQNDSQ IAMATTVSSPQVRSRSKSKEHSQTEHSTDKQSPLSQSESQSQGRPSRRTRLSVISSEVSD KSQSGEGSQTDSQTGVSVSKNKLDTPVPNIADGQSPGRPKRTRRAEAADAQSKEKHANEN EPVSDLSQSGSQTLAPARGRPGRRKKAEEDAASSKDAAQSQSVNSESSQTEETKDSQDSS QGRNKYNTRRSSQGLLQPVENSESGTSETKEGQRTKKARGHRSLASEVVPDTTAHNKVSE KMLDKENADPVEMTEKPVEPEACLGVSILSKTSSDEKEEKVSVTEDPESSGPVSDVSSEK QEENVQCDSQTDPSVLKSKPVVSDEASQSPNAESAKSEQKHEESKMEVDSEKVEESAAME EKAMEGQTLASSQNNLVLPEKVVLKTPDLHRCPHTKRGRGRRRSANCNCFLARSAALSQE NVTSDSQASQDLNNELSQQSNTLQSELSDAKPDLIEKEGDVAVVDNCPVVAGDQSSPALT NTTDGGLPTETPVEEPDVINIQESGVKEDTNQVVEEDQNGNADEGAGDAEKKIQEKENDS CPTGNTISHEQSLRLSPQGASENHGEPVEDGALCQDQSELPVQQIAVDCDSEEKPELPMK DDEQEIGEDGITPHLEEDAEDAQIDQEDQEVEPKADLSEVPLPPQTASAAETCLDSPPKH KYSEALCGEVAQSPSGSVTRGVWSPTASPSTSILKKGQKRQFEDDTPSPLLKSRRVSFAN PIYQQELADDIDRRSPVIRTSSPRSKSIGQPKYITTPTKGLLTLSPRNLRSPGYKSSKKC LISEMSQEPRPIPKDCVYPALVCCSTPVEAVLPQISSNMWPRGLGQLVRARNIKTVGDLS ALTPSEIKLLPVRSPKLSNVKKALKTYHEQQRKGRPDDLKSFDEMEKMTSEPEEVDAAPN QEEEHVSTNAQDVLTSEMTPVSEQKEEAPVSVELLSDVAALGARLTPEELSRCTPRELGA MHEQLSGMMRNIVDHLQSRLVSKLEDSLL NT seq 7290 nt NT seq  +upstreamnt  +downstreamnt atgatggccacggtacctctgtcaagctccagccttcttcctctcctggagtctttagaa gatgatgcagccggagcgtcagagcagactgatgcttaccttactattgccaatcgactc agtggagaagatgggcgacaattctttcctataattgttaagcacttttcacgtctgggc aaatctcttcaaactcacatatccagtgagaatgaagagctaagtcaggctgctcttcaa gctttgggcttttgtgtattcaacacaaacattgtctcaggcatcccagctcattttgct gaggaaatacttttagccctttgtgcgctagtattaaaatccacagacaagaacacatgc acccgagcattatgggttatctcaaagcagaactttcctgcagaggtggtgtccaagaag acaccagaaatcctcaagactctagatgccatgcagacaagagacatacagtcaattctg atggagcatgagtcacttaatgttgttataaagcttctggatcaggcacccactcagatg ggtcaaggagcagtgttctgggctaagctggtcattcctctggtggtccactctgcctcg aaagtgcgcctgcgtgcagctgcagccttagagatgggattgccccttcttctggagaaa cagcaggaggtggctgccattgtagagccaatgatgtcaacgaaactcatcccagaaatg cagaaactcttctccacaaagaatgaaagtaatgttctgaagctctggcctttatttgtt aaacttttgggcaagttgcttcacaaaggaggtgccttcataaactcgctgctgtatttg gaggagctgggtttccgcagctcttctcccaacattaagaaaattgctttccttgcctgg aagagccttattgacaactttgctcttaatcctgaaatcctttgtagcagcaaacgactg aagctgctcatgcagcccctcagctccattcttgtgaggactgaagccctgttactcacc aagttagaggtctggtggtatctggtagttaaactggggcccaacttagctactaatttt gagcaggttgctctaccactgctacagaatacactttctccagatgggtcactgcagggc ccagccactcctgctagaaacagtagccagagcaatggtgttgggctgagcacccctaaa tcaagtgttccttcatgtagcactccaggtgctaatcctcgattgagcctgaacagcagc acaatgagcctcaacagcagcacaaatgtccaacagtcctacacctccatccagctgctg ggacttgaaatgctcctgcactactttctaggctctcaggccacttctgctgctgcaaaa aacaagctgcaacttaatcttgaacctctgacccacaacctgctgagcagccagtctttc ttcagcaagcactcttctacttttatctcttctgttaagaatgccttcatggctgtgggc aaggatgctccagaaccactgcttagtctgatttggaatagccttgttaacctagtcagt acaactatagagaccgctggtaataaaaaggaaagacagggttctgaagtacttactcac ctgctgcaagcactgcagtccatcctgtcttctgaggccctgccagctccacgtgctctg gctttgttggaagccacagtgaagggcatacctcagaaagtacttggctcagctgcatat caagttgccaacatggatgtcctaaatggtacaccagcactttttctaatactgctcttc tacaacagcaacatgctctcatcattcttggctgatgagaagtttttcctgtgccttgag acactggtcagttgtggtctcagtggacctacttcacccttagcttttgtagaggcagtt ttaggcacaatcagtcgcaatgtagaagctgtggaaaacaaagagcatttatggcgaatg tggagtgtggttgtgaatcctctgactgataccattacacagacaaacgaggtaaaccag ggagatgctcttgagcataacttcagtgcaattcacagcgccttgatgttccccattact caccttttgcccggatctgctcttccacagatgacacagaagtctatgctgagcacatgg tccagactttacaaggcatttgctcgctgttcggctctggtggccacagcagaggagaat gtgtgctgtgaagaattatgcaccaagatttctgctactctagatggtcaagccctcaag actttgtccacacttgatgcagtggcgaatatcttgcactcgattgttgacagtgtggat ttttctccgttcactccacaatttcagcagaagatgaaatcaccacacactccactaggt tgggtccggaagaggaacaatgctttagggaatctctcaaaattccatgtcctgttggtg cagtctttggatgctttacagcatttgaactcctcaaatgatggtggtgcagttttaagc agcatcggcagcatgctcatctccgttgtctctacgctttttacaagccttgctctgccc acggttattcacgagtctctgtcttcacttaccaaagctcttgcactactatatgaacaa gtagaaagctcagacgacgaacagtcaaagtcgcactctgtgctaggatccaagttggag aagttggcaggggaaatgcttggctgcctccagacacgttctgcacttctgtatgatgat gatctactggcagtgctttctcctctgctttgtgtcctttttccacataaaaacaagcaa attcgtttatctgtcactcagttctggaatgccacttttggaaatgcacttactctgacg taccctgagatgctcacgcctgttttaagccaagctaagcagaaggctcctttaatttta cctggatttgaagcagttggaaactcagaagatttcagtggagagatttcaagcgagtgt tctcaacttgacactaaaatcagtgggatcaaggtgacaccagcagcaaagagggaatcc ttgttagctaaagcaggagaaataaaggaaaggagctctaccacatccaagcctgtatct gtaaagctagattttggatctcccaagcctccacgaagagaagttcttgaggaagaggca tctgtcgattttgtttttattccacctgagtcaaagaagagggttttaactgaacaccag aaagaagtcaaaaggacaaaaagggatgacatccccgccatgtacaataacctggatgct tctttggatactacagtcttcacccagtacactcagagtcaagaggaatccttggataaa ttgccagcggatgaatctcaagataaagtaaataaggttgaaaccaagggttcagacact gaggaatcatctgtgagcgactctaaagaagcagaaaataatgtttgcccagagaatgat tcaccagagaaagtaacaaacaatgctgatggagacactgagatgcagtcgcctcctgga gacctcccagtgtcagatgctggtgagcatgaggacaccactgcaaaggaccacagcccg aatgtgtctggttcatctgacatgatctctggtactcctccaaaatccagcagccgtcgt cagtccttcatcactttggagaaatatgtagaacccaggccagccagtccaatgagtgtt actaaatttactggcccacttacaaggacttctcacagtcaggaaactccaaagtcagaa catttgtctccaaaggcctcttcccattcacagctggaagctggtacaggagctggggat tctgcgcctcagactgagaaagaaaatgtagagatggagactgagatgacatctgtggct aatcattctaatgaaggcacaggagatgaggaggatgtgatcccagacactcagactcag gttctgaatggagcagttgatgatgaagcagataattctttggataaatcccaggtagag atggaaatagaagcttcacctgaggggccttcagaaggtcattctcctgtatcaaattca agccaggctgagccacggaggtcaggcaggcgtagaagtaagccggttagaccaggtgaa gaggaattaaaaagtaaacagcagaaaaaggattttgttgatagttctgctttgcctgtg actgaaaaacctgcacctaccaagcaagacgaaaatgttttgcctggcagaagtagaaga ggtaaagttcttgaagagaacaagggtgaacttgagaatcatagccaaaatgactcccaa atagctatggctacaactgtaagctcgccacaagtaagaagtagaagtaagagtaaagag cacagccagactgaacattccactgataagcagtctccattaagtcaatcggagagtcag tcacagggtaggccttctaggcgaacaagactgtctgttatcagctctgaagtttcagat aaatcacagagcggcgagggttcccaaactgattctcaaactggtgtatctgtctcaaag aacaaacttgacacacctgtaccaaacatagctgatggtcagtcacctggtaggccaaaa agaacaaggagggcagaagctgctgatgcgcaaagcaaagaaaagcatgcaaatgaaaat gaaccagtcagtgacttaagtcagtctggttctcagactttggcgcctgcaagaggcaga ccagggagacggaagaaggctgaggaagatgcggcctccagcaaagacgctgctcaatcc cagtcagttaattctgaatcttcacagactgaggaaacgaaagactctcaagattcttct caaggacgtaacaaatacaacactcgtcgctcatctcaaggtttgttgcagcctgttgag aactctgagtctggtacttcagagaccaaagaaggccagagaactaaaaaggctagaggc cacagatcattggcttctgaagtggtgccagacacaacagcgcataataaagtttcagag aaaatgttggacaaggagaatgcagatcctgttgaaatgactgagaaaccagtagagcca gaggcctgcttaggtgtgagcatactttctaagaccagttcagacgagaaagaggagaag gtttctgtaactgaagatccagaaagttcaggtcctgtttctgatgtttctagtgaaaaa caggaggagaatgtacaatgtgattctcaaactgatccttctgttctgaagagcaaacct gttgtatcagatgaggctagccagtcacctaatgcagaatcagctaaaagtgagcagaaa catgaagaatctaagatggaagtagattctgagaaggtagaggagagtgctgcaatggaa gagaaggctatggagggacaaacgttggcatcttcacagaacaacctagttcttcctgaa aaggtagttttaaagactccagatctgcacagatgcccacatactaagagaggtcgtggt cggagacgttctgcaaactgtaactgtttcctggctcgtagcgctgccctctctcaagaa aatgttaccagtgattctcaagcttctcaagacctaaacaatgaactctctcagcaatct aacactttgcaatctgagttaagtgatgccaagcctgacttaatagaaaaggaaggtgat gtggcagttgtagacaactgtccagtggttgctggtgatcaatcttcacctgctttaact aacacaactgatggaggacttcccactgaaaccccagtagaagaacctgatgtaattaat atccaggagtctggtgtgaaagaagatacaaaccaggtagtagaggaagaccaaaatgga aatgcagatgaaggagctggtgatgcagagaaaaagattcaagaaaaggaaaatgacagc tgccccactgggaacaccattagtcatgagcagtctctacgtttaagccctcaaggtgcc tctgagaaccacggtgaacctgtggaggatggcgcactatgccaagaccagtcagaatta cctgtccagcagattgcagttgactgtgacagtgaagaaaagcctgaattgccaatgaag gacgatgagcaggaaatcggtgaggatggtattactcctcacttagaagaggatgccgaa gatgcgcagatagaccaagaagaccaagaagtcgaaccaaaggctgatctgagtgaggtc cctctgcctcctcagactgcctccgctgctgaaacatgcctagactccccacccaagcac aagtactctgaagctctttgtggagaagtagcacagagtcccagtggtagtgtaactcga ggcgtatggtccccaacagcttccccatccaccagcattcttaagaaaggacagaagagg caatttgaagatgatactccatctccacttttaaagtctcgcagagtgtcctttgcaaac ccaatttaccagcaggaactggctgatgacattgaccgtcgtagtccagtaataaggacc agttccccaagatccaaatctatcggacaacccaagtacatcaccactccaaccaaaggt cttttgacgctcagtccccgcaatcttcgcagtccaggttataagagttccaaaaaatgc ctaatctctgaaatgagtcaggagcctcggccaattccaaaggactgcgtttatccagct ctggtctgttgctctactcctgtagaggctgttcttccacagatttcctccaacatgtgg ccacgaggtcttggtcagcttgttcgagccaggaacatcaagaccgttggggatttaagt gctcttacccccagtgaaatcaagctgctccctgttcgctcaccaaagctctcaaatgtg aagaaagcacttaaaacctatcatgaacaacagcgaaaaggacgacctgatgacctgaag agctttgatgaaatggagaaaatgacctctgaacctgaagaggtagatgctgctccaaat caagaggaggagcacgtttcaacaaatgcacaagatgttctcacatcagagatgacacca gtatccgagcagaaggaagaagcaccagtatctgtggagttgttgtcagatgttgctgct ttgggtgctcgactaaccccggaggagctcagtcgctgtacgccgagggaactgggtgcg atgcacgaacagctgagtggaatgatgagaaatattgtggatcatcttcagtcccgttta gtcagcaaacttgaggacagtttactctga

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