KEGG   Astyanax mexicanus (Mexican tetra): 103021971
Entry
103021971         CDS       T05042                                 
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X2
  KO
K08518  syntaxin-binding protein 5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103021971 (stxbp5b)
Membrane trafficking [BR:amex04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103021971 (stxbp5b)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    103021971 (stxbp5b)
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR5 Beta-prop_WDR90_POC16_2nd WD40 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_NUP159_NUP214 Lgl_C Beta-prop_VPS8 EIF3I PEP5_VPS11_N Synaptobrevin RAB3GAP2_N
Other DBs
NCBI-GeneID: 103021971
NCBI-ProteinID: XP_007252030
Ensembl: ENSAMXG00000000560
LinkDB
Position
14:complement(17854907..17893261)
AA seq 1182 aa
MKKFNIRKVLDGLTAVSSSSSSASPQTGNKENDIIQETLQSEHFQLCKTVRHGFPYQPSA
MAFDPVQKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLQFLINEGALVSVLADDSV
HLWNLRQKIPAVLHSLKFSRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGFVVLWDLKSKKADYRYTYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNVRSPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKT
ARAGEAFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLALCETPYPNDFQEP
YAVVVLLEKDLVVIDLAQPGYPSFESPYPLSIHESPVTCCEYFADCPTELIPALYSVGSR
QKRQGYSKKEWPISGGNWGQGAQSYPEIIITGHADGSVKFWDASALMLQVLYKLKTVKVF
EKARNKEEKPSTDIVEEDPFAIQSLSWCPESRVLCVAGVSAHVLVYWFSKQEITTEEVQL
LEVRMQPELNEVDSPDAGGEQASAVSTPGASSSPQTSDPQKHPSTSSNNSSDGLRDNVPC
LRVRNTPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVAFGNSNGLAVVDYLQ
KTLLINVGTAELYGSSDPHQRQPRSPRKARQPSGGLCDVNDGSLGSEDRCKSPTSGSGSP
CHSDDESKQKFLERVKSKSKLISKSVANDFAKMSRKFSMAADQKQEGRLCRQHSLPSQIL
QCGVEVSRRKARTISRTHIMSKSNARDNSFSRSRSSSVTSIDKESREVISSLHFCDCLSR
KSEVAAVTSLWVGTSLGTMLAISLNVPSTPEQRMQQTVGISFCGSVVRLKGGIQRMALLD
STGSLQPPAYEGWYDPNAPEEEKEKTRKRRPASPPSTQENQDSHYAVICSEKQAKVVALP
SQNCVFEHNITENSFVLRADVVVMPAGICIACFCANGHIMTLSLPSLRPLLDVNYLPLTD
MRIARTFCFSNQGQALYLTSPTEIQRLTYSQETCDNLQEMLGELFTPVETPEAPNRGFFK
GLFGGGAQSLDREDLFGELAAGKASRSLAQHIPGPGSMEGMKGAASGVVGELARARIALD
ERGQKLGELEERTAAMMASADSFSKHAHDVMLKYKDKKWYQL
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatatcagaaaggtgctggatggcttgactgcggtttcctcctcctcc
tcgtccgcctcgcctcagacggggaacaaggagaacgacattattcaggagactctgcag
tcggagcatttccagctctgcaagacagtccgacatggtttcccttaccaaccatccgcc
atggcgtttgaccctgtgcaaaaaatactggccattgggacgcagagtggagccctaaga
ctctttggccgagcaggagtggagtgctactgccagcatgagtccggctcggccgtcatc
cagctgcagtttctcatcaatgagggggcactagtgagtgtgttagctgatgacagcgta
cacttatggaatttgagacaaaagattcccgctgttctacactctcttaaattcagtaga
gagaggattacgttttgccatctgcccttccagagtaagtggctgtacatcggcacagaa
agagggaacattcatattgttaatgtggagtcctttactctctcaggctatgtcatcatg
tggaacaaagccattgaactctcttcaaaaacccaccctggacctgtggtacacatcagt
gataaccctatggatgagggcaagcttttaattggttttgaatgtggtttcgtcgttctg
tgggacctgaaatcaaagaaagctgattaccgttacacttatgatgaggcgatccactct
gtggcctggcaccatgaggggaaacagtttgtgtgcagtcactcagatggtacacttacc
acatggaatgtacgatcccctgccaagcctgcacagatcattacaccacatggtaagcaa
cccaaggatggtaaaaagcctgaaccctgcaagcccattctgaaagtggagtacaaaaca
gccagggcaggggaagctttcatgatattgtctggaggtctttcgtatgatactgtaggc
cgcagggcctgtctgactgtgatgcatggaaagagtactgcagtgctggagatggactat
cccattgtggattttctagcgctgtgtgaaactccctatccaaatgatttccaggagcct
tatgctgttgtagttctgctggagaaggatttagtagttattgaccttgcacagcctggg
taccctagctttgagagtccatatcctctgagcatccacgaatcccctgtgacctgctgc
gagtactttgctgactgccctactgaactcatccctgcactttactctgtgggctccagg
cagaaaaggcaaggctacagtaaaaaggaatggcctataagtggtggaaactggggtcag
ggtgcacaaagctatccagagatcattatcacaggacatgctgatggctcagtcaagttt
tgggatgcttctgcattaatgttacaggtcctgtacaagttgaaaactgtaaaagtattt
gaaaaagctcgcaataaggaagagaagcccagcactgacatagtggaagaagaccctttt
gctattcagagcctgtcctggtgccctgagagccgagtgctatgtgtggctggggtctct
gctcatgtccttgtttactggttcagcaaacaggaaatcaccacagaggaggttcagctg
ttggaagtacgtatgcagcctgagctgaatgaagtagactctccagatgcaggaggagaa
caggcttcagccgtgtccactcctggagcttcttccagtcctcaaaccagtgacccccaa
aaacatccatctaccagcagcaacaactcatctgatggcctgcgggataatgtaccctgt
ctgagagttagaaacacaccactgaagcagtctccaggctaccaggtggaactggtcatt
cagctggtgtgggtcagcggggagccgccacagcaaatcaccagcctggctgtcaactcc
gcatatggcctagtggctttcggtaatagtaatgggctggcagttgtggactaccttcag
aagaccctgctgatcaatgtgggcacagcagagctgtacggctcctctgatccacatcag
agacaaccacgctcaccccgtaaagcaaggcaaccgtctggaggtctctgtgatgtcaat
gatgggtcgttggggtcagaagaccggtgtaagtcacctacatcaggttctggctcacct
tgccattcagatgatgaaagcaaacaaaagtttcttgaaagggtgaagtcgaaaagcaag
ctgatatcaaagagtgttgccaatgactttgctaagatgtcacggaaatttagcatggct
gctgatcagaaacaagaggggaggctatgtcggcagcattctctccctagtcagatactt
cagtgtggtgtggaagtgtccagaagaaaagcaagaactatctccaggactcacattatg
tctaaatccaatgccagagacaactcgttcagccgctcgcgcagctccagtgtgaccagt
attgacaaggagtcacgcgaggtcatctcttctttgcatttctgtgactgcctgtccagg
aagagtgaagtagcagcagtcaccagcctgtgggtgggcacctccctgggcaccatgctg
gccatctcccttaatgtgccttccaccccagagcagaggatgcagcagactgtaggcatc
tctttctgtggttcagtggttcgactgaagggaggcatccagcgcatggctttgttggat
tctactggttctctccagcctcctgcttacgagggctggtatgacccaaacgcccctgag
gaggagaaggagaagacgagaaagcgacggcccgcctctccgccgtccactcaggaaaac
caggacagccactacgctgtgatctgctctgagaaacaggccaaagtggtggctctgcct
tcgcagaactgtgtgtttgaacacaacatcacagagaactcgtttgtgctgagagcggac
gtggtggtcatgcctgctggcatctgcatcgcctgcttttgtgccaatggtcacatcatg
actctgagtttgcccagtttgcggccactgctggatgtaaactacctgcccctgacagac
atgcgaatagccagaacattctgcttctcaaaccagggccaggctctgtatctcacctcc
cctacagaaatccagagactgacctacagtcaggagacctgtgataacttgcaggaaatg
ctgggagagctctttactccagttgagactccagaggctcccaatagaggcttctttaag
ggtctttttggaggtggggcccagtcgctggatagagaggatctcttcggtgagttggca
gcaggtaaggcatcacgcagcctggcccagcatatcccaggcccaggcagcatggagggc
atgaagggggcagcgtcaggagtggtgggggagctggcgcgtgctcggatagctctggat
gagagagggcagaaactgggcgagctggaggagaggacagcagccatgatggccagtgca
gactccttttcaaagcatgcacatgatgtgatgctgaaatacaaggataagaagtggtat
cagctctga

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