Astyanax mexicanus (Mexican tetra): 103021993
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Entry
103021993 CDS
T05042
Symbol
supt4h1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103021993 (supt4h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103021993 (supt4h1)
03019 Messenger RNA biogenesis [BR:
amex03019
]
103021993 (supt4h1)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103021993 (supt4h1)
RNA polymerase I system
103021993 (supt4h1)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103021993 (supt4h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
103021993
NCBI-ProteinID:
XP_022521500
Ensembl:
ENSAMXG00000041272
UniProt:
A0A3B1K3E6
LinkDB
All DBs
Position
1:complement(12696619..12702487)
Genome browser
AA seq
117 aa
AA seq
DB search
MSLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGV
LAMMSPEDSWVAKWQRIGNFKAGVYAVTVTGRLPPGVVRELKSRGVIYRSRDTAVKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggagacggtgcccaaggacctgcgccacctgcgggcgtgtctgctgtgctct
ctggtgaagactatcgaccagtttgaatatgatggctgtgataattgcgagtcatatcta
cagatgaagggcaatcgggagatggtttatgaatgcacaagctcatcgtttgatggtgtt
cttgcaatgatgagtcctgaagacagctgggtggccaaatggcaaagaataggaaacttt
aaggcgggtgtttacgctgtaacagtgactggccgattaccaccaggtgttgtgcgagag
ctgaagagcagaggagtgatctacaggtccagagacacagcagtcaagacataa
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integrated database retrieval system
