Astyanax mexicanus (Mexican tetra): 103022060
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Entry
103022060 CDS
T05042
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103022060 (rlim)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103022060 (rlim)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103022060 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103022060
NCBI-ProteinID:
XP_007228478
UniProt:
A0A8T2LK24
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All DBs
Position
10:1615426..1625737
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AA seq
698 aa
AA seq
DB search
MESSDNAEQGGSEQSDSQRRQQLDRLDREEAFYQFVNNLSEEDYRLMRDNHLLGTPGELT
EEELSNRLQQIKDGPEQPHNEGSGSGSNSGSSSSSSSNNSPESSSEQPRVPDQQEEASNG
DTLLDWLNTVRQTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEINVNRNIAEQQTQTE
AERLEGDQVSPDAAVSEAEPPMETAEVVEEPVVEEMAVIVEPEPPVPEVPEVPEVPEVPE
VPEVPEVPAATSPPSPPCPPSPPSPPSPQNQVSPPPPPPPPPPPPPPPAPAPSVTPVEPT
VPPRRGQIRARSPSPEQRRTRARTARSRLPVNLDQLDGLPQVHNGLPSHSHEPVPEAQVE
GSSRTRLHVLSRQSNIQAEAQESVEAAEAPAAPQQGDAPSGEAGASGRRPPTIMLDLQVR
RVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVSTIRIPI
RRISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDSDSSDSNRGSNPSADAADTPGNP
GTASASVVAEAPVTSAGGSSEVGASETRTEEREGSAVPPQARESRPRPRAPISLEETASL
PFLRLAHFFLLNDEDDDQPRGLTKEQIDNLSMRNFGESDAFKTCSVCITEYAEGNKLRKL
PCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcagacaatgcagaacaagggggcagcgagcagtccgattcacaacgcaga
caacagctggacagactggacagagaagaggctttctaccagttcgtgaacaacctgagt
gaggaagactacaggttgatgagagacaaccatctgctcggcaccccaggcgagctcact
gaagaagagttgtcgaaccgccttcagcaaatcaaagatggccctgagcagccacacaat
gaaggcagtggcagcggcagcaacagtggcagcagcagcagcagcagcagcaacaacagc
cctgaaagcagtagtgaacagcccagagttccagatcaacaagaagaagcatccaatgga
gacactcttctagactggctcaacactgtgcgccagacgggcaacaccacaagaagtggc
caccgggggaaccagtcgtggcgggcggtgagccgaaccaacccaagcagcggagatttc
cgtttcagcttggagatcaacgtcaaccgcaacatagccgagcagcaaacgcagactgaa
gccgagcggctggaaggagaccaggtctctccagatgctgctgtttctgaggctgagccg
ccgatggagacggctgaggtggtggaggaacctgttgttgaagaaatggctgttatagtc
gagcctgagccgcctgtccctgaggtccctgaggtccctgaggtccctgaggttcctgag
gtccctgaggtccctgaggttccagctgcaaccagcccaccaagccctccgtgcccacca
agtcctcctagtcctcctagcccacagaatcaggtttcacctccaccaccaccacctcct
cctccacctcctcctccacctcctgctcctgctccaagtgtaaccccagtagagcccacc
gtgcctccacgtagaggccagattagagcacgaagcccaagcccggaacagcggagaacc
agggcacgtacagcaaggagtcgattacctgtaaaccttgatcaattggatgggcttcct
caggtccacaatggccttccctctcacagtcatgagcctgttccagaagctcaggtagag
ggcagctccaggactcgattgcatgttctgtctaggcagagcaacatccaggcagaagcc
caggagtctgtagaagctgctgaagctccagcagctccacagcaaggtgacgcgccttca
ggcgaggcgggagcttcaggcaggcgccctccgactataatgctggacttgcaggtacgt
agggtgcggccaggcgaataccgtgaaagagacagcatcgctaatcgcacacgctctcgt
tctcagacctccaacaacactttcctatacgaaaccgagcgtggaggcttccgcaggacc
ttctcgcgctccgaacgtgcaggagtgaggacgtacgtcagcactatccgcattcccata
aggaggatctccgatgcgggtctcggcgaggctacctctctggctctgcagtccatgatt
cgacagatcatgactggctttggtgagctcagctacttcatggactctgactcagactct
tcggactccaatcgcggttccaacccttcggcggatgctgcagacacgccggggaatccc
ggcactgccagcgcctctgtggtggcggaggctcccgttaccagtgctggaggctcaagc
gaggtcggtgcctcggaaacaaggacagaggaacgcgaggggagcgcagtgcccccacag
gctcgagagagcaggccaagacctcgggctccgatcagcctggaggaaactgcctctctg
cccttcttgcgacttgcacatttcttcttgctcaatgacgaagacgacgaccagcccagg
ggcctcaccaaagagcagatcgacaacctctccatgcgtaactttggcgagagcgacgct
ttcaagacctgtagcgtctgcatcacggagtacgcagagggcaacaagctccgcaagctg
ccctgctcacacgaataccacgtgcactgtatcgaccgctggctttcagagaactcaact
tgcccgatttgtcgcagggcagtcctcgtttctgccaatcgcgagagtgttgtctag
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integrated database retrieval system
